Gene detail

Detailed information of c0465.g007.t1 in Palythoa umbrosa

Genomic Location: c0465:122644...154345
NR annotation: XP_027059802.1, kinesin-like protein CIN8 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0465.g007.t1

ATGAAGGATAAAAGAAACTCGAAGGGAAAACAAGAAGCCGATCGAATTCGTGTCTTCGTTCGTGTCAGACCGCTCACGACGGATGAACAGAAAAAGGGAGAAAAACCAGGAGTCGAAATTTCGCCGGAAAGAGCTGAGATCAAACTCAATGATACAAGAGAAAGAAGATACAAGTTTGATAAAGTCTTTCATCTCAGTTCAACCAATAAAgagGTTTTCAATTCCATTGGTCGGCCTCTGGTAGATACAGCATTTAATGGTTTCAATGGCACTCTGATGGCCTATGGCCAGACAGGATCAGGTAAAACATATACTTTGATGTCAAGTGATGGCATTGCTGTTCAGTGTGTTGACAAACTTTTTAGAAGAATATATCAGGACTCATATCATAAGTACAAGGTATACATGTCGTACCTTCAAATCTACCAAGAAAAGATTTATGATCTTCTTAACCAAAATAGCAAAATGGAATTATATCTCCGAGAGGACCCCAAAAGAGGTGTATTTGTTGAAAACCTCACCGAATATGTTGTTCGCAGTACAAGTGAAGTATTTAACTTGCTCAGGGCTGGTAAAAAGAGGCTGGTATTTGCAGAGACTAAAATGAATAGGGTTTCAAGTAGATCTCATGCAGTTTGTCAGATAACTGTTGAAAGGTCACGGAACAAAGACACTGTTAAACCAGTTCGTGCAAATTCAGTTGGTGAAAGTTccaattCCGATTCCAAAACCCTTCAAAGTAGCCAATCATTGAGCAGCTTAGAGCGCTGCAGTGGAATATCACGGATACCAACTCCCAAGAAACCCTCTAGTCCTTGCACTCTTCCCTCCAAGATACCAACGTTTAGCCCCCATATCACTTCCACACCCAATCTGGCAATTGCTTCGTCCAAGCCCAATCCAGTTCTTCGTCACAGCTTAGCAAGTTCGATTCCTTCTCCTGACTTCTTATTGCCTGATCGCCGCAATAGATGGTCATCTACAGAAATGTTACGGAGCCAGTCGGGTACTTCACTTGTTAGTGGTGTGAGTGAATCAGATTTTAGTGACTTGTTTGTTGATCTGGATGAAAGCGACAGTGAGAGGAGTCTGAGAACAAGCTTAAGCTCAAGTACTGATCAGCTGGAGGACGATGATGACGATGATGCATTCCTTAAATCGATACGTCTTCAAGATGACGTAGTGGTCAAAGGACACATCAATATATGCGATCTTGCCGGGAGTGAAAGAATCAAACGTACATTAGTAGAAGGTGAACGACTGTCTGAACTACAACACATCAACCTTTCGCTATTGGAACTTGGAAACACGATTCACGCACTCTCTGAAGGAAACCGGACACACATTCCATTTAGAAACTCGTCACTTACAAGGCTACTGCAGGATAGTCTGGGAGGCAATTGCAAAACAAGCTTTGTGATGtgtgtGTCTCCGAGAGTGATTGACTTAAATGAAACCCGATGTACGTTGGATTTTGGTCAGAGGGCCAAGCAGATAACGACAAATGCCCACATGAACAttgaaGTTGACTTTGCTAAACTTTCTGAAGATCTACGAAAGCGCTTGGAAGTCCAAGAGCTGGAAATGAAAATGCAACGAGAAAATTTTGAGAGGCAAGCGTTGGCAATTCACGACGAATCAGAAGTCAAGATTTCGGaactgcaagctcagttagaaatgGAGCGGGAAGCACAGATTGAAAGGGAAAATCAGTTAGAGGCCGAGAAAGAAGAACTGAAGAAGCTGTTAGAAGAGGAAAAGCGGAACTCTGGGGTTATTGCAGAACACCAAAAGCTTCTGATAGAGAaaacactgcaagaagagaTCGGAAAAATAGCAAGAAGGGAGCAGCTCGAACGGGAGAAGCTTTGCAAACAACTTGAAGACGAAAAGCAACGCTCACTTCTTCTCGTACAACGAGAGAAAGAAAAGATGGAGAAACAATTTGAGGAAGAAAGACGACGATTTAACTCGAGACAGCAGATGGAAAGGTCCAAGTTTGAGAAGGAATTAGTTGAGGAAAGGACTAAATACGCTTTTACCGAAGAACGAGTCCATAAATCACCAGTGGAAACAAGACTACAGGGTATTACACTCGAGCCATTTGAACTGCCGTCAATAAGCATCGGATCAGAACAGGGCGTTAATGAGAGCGCTTTCGAAACTCTTTTCAATGTGTTATTAGCGGAGATGATGTCGCTGCAATTGCTTTATCAAATCCAGGACCTCTCCTCTGCCTGCAACGTCGAAGCTGTCAGATCACGTGACAGCGGCTGGGTTGATTACGACGATGACATCATCGAGGCAGTGGGGACAAATTTGCTAGAAAAGGGTGGACTACTTTTGACCAACCTTCGAGCCGCAAAACAAGGCGACGCTATTTCCGTGCAGAGCACAGACTCTTTGAGGGATTTCCTCAATTTACAGTTTCCTCAAACTATAACCAGGACTGAATCAAAAGAAAAAATTGACGAAGTGCCACAATTTAAGGCGGAAAATTATTCAAAGCCAGTTGATGAGGCTCCAATTAAGGATGATGTTCGCTCAGATATGTCGAGTGAAGCAACTCGGAGTGGTTCCTCTTTTTCTAGCTCAGACGGATCCACGTGCGTTAGACTGTCGTCTTCTTCAAGTTCAACTTTTGGTTCATATTTGGAAGACGAACCCTTGAGTCCAAAGCGGCGATTGCACCCAGCAGACAGTGGTTGCAGCAGTATTAACACAGACAGTGACACCGATCATTCTCCCATTCATAAAAAATACCACGACATTCCCGTTATATTTGAAGAACCTCGTGCTATTAATAAGCTAGTTTCTGTCCCGCTGGCACTTgaagaagaagaCGAATTTGAACTTGATGAAGAGATGGGACAGATCGAGCGACCATTGGATGAGAAGCTGAGTCAGTTGGAAAACCACCTGATGCAGCTCAAGTCTGAGCTGGACGTTGAAACGTTCAGTTTTTTCTCCCAAGTGTTTGGGATGGACATGTCGGAACAGAGAGAAAAAGAGGCGTCTTCACTAACGATGAGGCATCTTTTGGAAGGATTAACTCAGACACTGCTGGAAAATCACGGCTTACCGGGTACGAAAGAGCACGATCTGTCGCCAGCCGTAATGGAGGAATCTGTAAACCTCTTACTTGTTAACAAGACTGTTATGAGTTGTATTCTGGTGTTGAAGAACCGGCAGCAAGAAGAAAAGAAACCCGATTTGACCTACAACAAAACCGTTATTCATGTCACTCCAAAGGTTGAGCAAGAGACTCAAACAGATTTGGAACAACCAAGATCGTTGAGAAGAAGAGTGCGAAGAGACATGGGAACGTTGACAGACCCGATAGTGGCCAAACCTGAGACAAGGGAAGAAGGAGTGCAGACCAACTTAGCTGCCCTGCTTCGGCCATTTGAGGTTCTTGACAGCAATTCATCAAGTATGTCATCTCTTGGTCCCGACGATCCGTGGAGTAAGAATTTGGATGAAGAAATGGAGAGGTCAGCGATACCTGACGGGGCCTCCGATGTGAACAGTCAGGCGGAAAACGAGCCTGCGCTTGCCAATGATGTCAGCGGTCAGGACCTGTCGTCAGACGAAGAATCATGTGAAGATAAATTGAAACACAGGAGGCGTCGTCACAGTAGAGTGGGCACTCTTCTGGCTTGTTTTCGCCCTGCTTTTCAACGGAAAGCTTCGGGAAGCAAGAAACACGAATCCTCGCGTTCCGAAACAAGTAAACTTGTTAAGGAATGA

Transcript

c0465.g007.t1

Protein

Uniprot

Uniprot term	Description
Q965T6	Kinesin-like protein klp-20 OS=Caenorhabditis elegans OX=6239 GN=klp-20 PE=1 SV=1
P46872	Kinesin-II 85 kDa subunit OS=Strongylocentrotus purpuratus OX=7668 GN=KRP85 PE=1 SV=1
Q9Y496	Kinesin-like protein KIF3A OS=Homo sapiens OX=9606 GN=KIF3A PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00225	Kinesin	Kinesin motor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019821	Conserved_site	Kinesin motor domain, conserved site	Interproscan
IPR036961	Homologous_superfamily	Kinesin motor domain superfamily	Interproscan
IPR027640	Family	Kinesin-like protein	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001752	Domain	Kinesin motor domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47968	CENTROMERE PROTEIN E	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003777	Molecular Function	microtubule motor activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0007018	Biological Process	microtubule-based movement	Interproscan
GO:0008017	Molecular Function	microtubule binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K17916	KIF16B, SNX23; kinesin family member 16B	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala