Gene detail

Detailed information of c0531.g002.t1 in Palythoa umbrosa

Genomic Location: c0531:17052...33388
NR annotation: XP_020624382.1, uncharacterized protein LOC110061862 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0531.g002.t1

ATGTTTTATGTTCCGAGTGGACGAACCTCGTCTGTTCTTGATGGAGAAATTCCAAGGAGTGCATCGGAAAACTCTCAGTATCGCCATCTATCACCAATGTCGCAGGGACTTTTGGCTTTTCAAAAACGAAAAGGGGTCGGCTCGGCACTTCTAACTATAACAATTGTTCAGGGAAGGAATCTTCCTGTAATGGACCCTAATGGCAAATCAGACCCGTACTGTGTTGTGACTGCTGGGGGTCATGAGGCAAGGACAGGTGTTCAGTATAGTACACTCAACCCAGAGTGGCGTGAAACCCTACAGTTTGATATAAGCGACGCTCCACAGCTGTTACAAAATAATGACTCAGGTGATGGAATTATATGCTGTTTAAGCCACTACCTGTTGATTGAAGTGTGGGACAAGGACACATTAAACAGAGATGATTTCATGGGGCAGATTATGGTACCAGTGTCAAAATTATCTGAACAGACGTTATCTGGCTGGTATCCCCTCGGAAGGTTGACACCTCGAGATGCAGTGTCTGGAGAGATTTTTCTGGAGATGACACTAAAGTCTGACCAGCCAATCAAAAGGTGGAATGCAGATTATGAGCTCTATTCAGCTTGCAAGAAACGGGTTGGGTTTGAAATGCCGATTTTGGCAGGAAGTCAAATTATTGACTTTCCAGGTGAGGCAGAGCATGTTGAGATGGTTCTAGATGAAGTTGTGATAGAAGTCAGTAAACATCGAGGTATTGGTCGTGTTTATCTGACTGATTATCGTCTTGTCATCATCTGTAATCCATCAGGCCACACTGCCGCTGGGCATAATACCGACATGTCCATGTGGGTTGCGCTGAATAATATCCAATCAGTTGACAGAGGGGAGGATGAGAAGGTTGTGCGTAGAACAGTACATGGTAATGCAGGGTTCTCAGATGTAAAGACATTCATAATCCGGTGCTGGGATTTCCGTACTATTCACTTGACGTTCATGAACTCACAACAGCCAGGACTAACATTCTTTACCAGTCCAACAGGGACGGCAAGCTGTCAGTCAAGTCCAGATTCTGTTCCAGGACCAACACAGCCTGCTCAACCCCAGTCATCTAATGGGAAGCAAACTGTCTCTGCCATAGGATCAGGCAATGGGTCAGATATAGAGCAGGTTACCTCCAGTGATAATGGCAGTGCAGGTAGTCCATGTGATCTGCCAAAACAAGCCGCAGTCATTGGCCAACCTCCACTGTCAGAGCAAGGACAGACAAATGTAGCTAATTCAGATATTACCAGATGTAGCAGTCAAAGCAGTTTCCAGGTTCTTTCACGCAgcagcagtagtggtagcagtgttgctGGTGTGAGTTCCCAGGACTCAAATGACGGCCCCCTGGTACCGCAAGCTACCACTGGAATCTTAGCTACAGGGCTTATAGCAGCAGCTGGAGCTGGGACAGATATTTCAGATGCTGCCGTCAAGATAAGAAGCGAAAATTTGTATTTACAGAGTTTTCTGCCATTTTATATCAATGCACTGTATCGTCGTCTTGATTACATCACTCTCAACGCAGTTGATTCTCCTCCTAGTAAGGGTTTTGTCAGCTGTCAGCCTAAAGGATTTGAGCTGTCATGTTGGAATGTGTATGATTTCAATGAAGAGTTTCGCCGGCAACAGGTTAATGATCGATGGAGAATATCAAacatcaatcaggaatttggattGTGCAGCTCATACCCCGAGTTGCTGTACACACCGGCAGAGATCGAGGATACAACCCTTCGGGAGTGCGCATCTTTCAGAAGTAAGGGTGCGGTTATGATTGGCCGATATGTGGACGAGAAGGGCGTGGCTGCATTAGTGCACTGCAGCGACGGTTGGGACAGAACTTCACAACTCACTTCCTTGGCACAGCTTCTGCTTGATCCCGAGTATAGAACTATAAAAGGATTCCAGGTTCTGATTGAAAAAGAGTGGATTTCTTTTGGTCACCGGTTCAAAGACCGTTTAGGCCACCCATCGTGTCCGAGTCAGCGGTCTCCCGTATTTCTTCAGTTTCTTGACTGTGCTTGGCAGATTTTGCAACAGTTCCCGTCGGCTTTTGAATTCACCGCTTCTTATCTAGTCAGAATAGCTGACCACGTCAACTCGCAGTGGTTTGGCAATTTTCTGTGCAACAATGTGAAAGAACGTCGAGACACCGAAGCCACAGCGCTAACGGTCTCCCTGTGGTCACATCTCGACGCTGCACGGGAGAGTTTTTTAAATCCATTGTATTCCAGATACAATGAGGTCCTCCTTCCCTTTAAGTCTGTTGGTCAGATGGTGGACACAGTAGTCTGGGTACCAGATGAGCGAGTACACGAATGCACGGACTGCAGACAAAGGTTTTCTCATTTTAAACGAAAGCACCACTGCAGAGCGTGTGGTCAAGTGTTTTGTGGTGATTGTACGTTGCAGAAGATCCGCCTTCCTCAGTTCGGGTACATAATTCCTGAGAGGGTTTGCGACAACTGCTATCAAGTAAACAGGGATAGAATTAGAGAAGAAGAGGAAGAAGATGGTTTTGAAGTAATTAATTTACCAGCTCTGTCAAGGGACAGGTAA

Transcript

c0531.g002.t1

Protein

Uniprot

Uniprot term	Description
A6QLT2	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2 OS=Bos taurus OX=9913 GN=MTMR2 PE=2 SV=1
Q13614	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2 OS=Homo sapiens OX=9606 GN=MTMR2 PE=1 SV=4
Q9Z2D1	Phosphatidylinositol-3,5-bisphosphate 3-phosphatase MTMR2 OS=Mus musculus OX=10090 GN=Mtmr2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06602	Myotub-related	Myotubularin-like phosphatase domain	Domain	Interproscan
PF00168	C2	C2 domain	Domain	Interproscan
PF01363	FYVE	FYVE zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017455	Domain	Zinc finger, FYVE-related	Interproscan
IPR010569	Domain	Myotubularin-like, phosphatase domain	Interproscan
IPR035892	Homologous_superfamily	C2 domain superfamily	Interproscan
IPR030564	Family	Myotubularin family	Interproscan
IPR000306	Domain	FYVE zinc finger	Interproscan
IPR016130	Active_site	Protein-tyrosine phosphatase, active site	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR000008	Domain	C2 domain	Interproscan
IPR011011	Homologous_superfamily	Zinc finger, FYVE/PHD-type	Interproscan
IPR029021	Homologous_superfamily	Protein-tyrosine phosphatase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10807	MYOTUBULARIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004438	Molecular Function	phosphatidylinositol-3-phosphate phosphatase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0046856	Biological Process	phosphatidylinositol dephosphorylation	Interproscan
GO:0052629	Molecular Function	phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0016311	Biological Process	dephosphorylation	Interproscan