Gene detail

Detailed information of c0546.g017.t1 in Palythoa umbrosa

Genomic Location: c0546:168434...187505
NR annotation: CAH3143145.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0546.g017.t1

ATGTCAGGAACGACTCCGAGGAAACCGAGTTTCACCCGTGCAGCATCTACCGTGAGTACAGACAATGATGAGGACGAGGCTACGGGTAGAGCGATCCTCGGCTCAACTCGCAAGAAGCTAAGTCTTGTGGTACTCTGCATCGTGTATTTCGCTGCAAATGCTTCATTTTCTGTGATATCGCCGTTCTTTCCTGGAGAGGCTGCTGAGATGGGAGCAGATAAAACAGTCATTGGTTTGATATTTGCTGTTTACCCCTTAGTGCAATTTGTTGTTGCACCATACATGGGAAAGAAGCTTCCCACAGTTGGTGCCAGATTCATGATGACCTCTTGCCTGTTTTTATGTGGAGGTTCAGAAATTATTTTTGGATTTACAAGTATGCTCCCAAAGGGTTCAGTTTTCGTTGTGTTTTGCTTTCTTCTGCGGATTGTGATGGCAGTTGGTGGGGCTGGTGCTGATACTGCATGCTTTGCGGTTGTGGCAGGAAACTTTGGTGAAAACCTGGGAATGGTTATGGGTGCTCTAGAAACTTTCTCTGGACTTGGAGTAATGGCAGGACCGCCGTTAGGAGGAGTTCTTTATGAGTATGGTGGATTCAAACTTCCCTTCATTGTCATGGGCTGTCTGCTTTTATCAACAGTTCCTGTAGTTATTTTTGTTTTACCTGAGCAGAAAGAGTTTCACAAGGCGGAAGGGTCATTGCTTCAGACAATCAGAATACCCGCCATAGCGATGATAGCATCCTGCCTACTCGTGGCAGGTACGCTGCTCAGTTTCATGGATCCAGTGCTTGCTCCTCACCTTAACAAGTTTGGTTTGGGACCGAGTTCAGTTGGCCTCGTGTTTCTGCTAGCCGCTGGAGTTTACGCTGTGACTGCGCCTCTTGTTGGTTGGATCTCCGATAAAACAGGAAGAACTCGTGTGATTATGGTTATAGGCGTAGTTCTGGGAACCGTATCCTACATGTTACTTGGACCAGCTCCGTTCTTTAAATTTCTTCCCAAGAGGAAAGTATGGCTGGCCCTGACGTCAATGGCTGTTCTCGGACTAGCGTTGAGTGCATATCTAGTTCCTTGTATGCCTGACATGATGAAAACGGCTAAATTGGAAGGAATGCCAGACGATATTTCTACGCATGGTATTATGTCAGGAATTTTTAACTCGGTGTTTAGTGTTGGAGCTTTCATTGGCCCTACCTTAAGCGGTGTTATGGTGAAATACCTTGGCTTTGATTTAGCATCTGCCGTTCTTGCATGCTTCATGGCTTTTCAGGGTTTGTGTCTCACCCTGTTTAGTATATATGACTACATGAAGAAACGGCCCAAACCAGGTATGAAGCCACTAATCAATGAAAACGGAGAAAGCAACTCAGTTGAGAGTAGTGTAAGTACAAAGGAAGAGAAGGGAGGCAGACGAGGTCGAGGATTACCAAAAAAATGGCCAATTGCTGGAGTCAAACAAGTTTTGTTGGTTGCGTCAGGAAAGGGTGGAGTAGGAAAGTCTACAACTGCTGTGAACCTTGCCCTTGGAATGAAAGCAAGTGAAAAGAACTTGAAAGTTGGTTTACTAGATGCCGATATCTATGGACCTTCCATTCCTCAGATGATGAATCTCAAAGGACAACCAGAACTCACAAAACAAAATCTCATGAAGCCCCTGGTTAATTTTGGCATTCCATGTATGTCAATGGGTTTTCTGGTGGAGGAAGGAGCACCGATTGTCTGGAGGGGTCTTATGgtgATGTCAGCTGTTGAGAAATTAATTCGACAGGTGGCCTGGGGAGAGCTTGATGTTCTTGTTGTTGATATGCCCCCAGGAACAGGAGACACCCAGTTGTCAATCTCGCAGTTAATTCctatctcagGTGTTGTCATAGTAACAACTCCCCAAGATATCGCCCTGATTGATGCTAGGAGAGGAGCAGAGATGTTTAACAAAGTTGATGCACCGGTTTTAGGAATCGTACAAAATATGAGCCACTATGTTTGCCCGAAATGCCAGCACAAGACATTTATATTTGGAGAGAATGGCGCAGAAAAAGTATCAAATGATTTGGGTCTTGAAATACTAGGCAATGTTCCCTTACACATTGATATTCGGGAGACCTCTGATCTTGGAAAACCGATTACGATATCACAACCTAACAGTAATCAGGCTTTGGTTTATAAAGCGATTGCTTGCAAAATACTGGAAAAGCTTCCTCCATTCCGTGATCCATTTCCCAAGAGAAACCCAGAAACGTAA

Transcript

c0546.g017.t1

Protein

Uniprot

Uniprot term	Description
Q8TB37	Iron-sulfur cluster transfer protein NUBPL OS=Homo sapiens OX=9606 GN=NUBPL PE=1 SV=3
Q9CWD8	Iron-sulfur cluster transfer protein NUBPL OS=Mus musculus OX=10090 GN=Nubpl PE=1 SV=2
Q54F15	Iron-sulfur cluster transfer protein NUBPL OS=Dictyostelium discoideum OX=44689 GN=nubpl PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07690	MFS_1	Major Facilitator Superfamily	Family	Interproscan
PF10609	ParA	NUBPL iron-transfer P-loop NTPase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000808	Conserved_site	Iron-sulfur cluster carrier protein-like, conserved site	Interproscan
IPR019591	Family	Mrp/NBP35 ATP-binding protein	Interproscan
IPR020846	Domain	Major facilitator superfamily domain	Interproscan
IPR011701	Family	Major facilitator superfamily	Interproscan
IPR036259	Homologous_superfamily	MFS transporter superfamily	Interproscan
IPR001958	Family	Tetracycline resistance protein TetA/multidrug resistance protein MdtG-like	Interproscan
IPR033756	Family	Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35	Interproscan
IPR044304	Family	Iron-sulfur protein NUBPL-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42961	IRON-SULFUR PROTEIN NUBPL	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016226	Biological Process	iron-sulfur cluster assembly	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0140663	Molecular Function	ATP-dependent FeS chaperone activity	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0032981	Biological Process	mitochondrial respiratory chain complex I assembly	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan