Gene detail

Detailed information of c0562.g009.t1 in Palythoa umbrosa

Genomic Location: c0562:128989...132152
NR annotation: XP_031559139.1, retinal homeobox protein Rx-A-like [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q0P031	Visual system homeobox 1 OS=Xenopus laevis OX=8355 GN=vsx1 PE=2 SV=1
P58304	Visual system homeobox 2 OS=Homo sapiens OX=9606 GN=VSX2 PE=1 SV=1
Q61412	Visual system homeobox 2 OS=Mus musculus OX=10090 GN=Vsx2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00046	Homeodomain	Homeodomain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001356	Domain	Homeobox domain	Interproscan
IPR051306	Family	Homeobox domain-containing regulator	Interproscan
IPR000047	Conserved_site	Helix-turn-helix motif	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46123	MIX-TYPE HOMEOBOX GENE 1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0000977	Molecular Function	RNA polymerase II transcription regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan