Gene detail

Detailed information of c0562.g012.t1 in Palythoa umbrosa

Genomic Location: c0562:167333...175043
NR annotation: CAH3157252.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0562.g012.t1

ATGGAAAAGAAAGACATCAGTTACAGACGATTTATGATGAAGTTGAGTCAAAGCTTGACTGAAGACGATATCGATTACTTGAAGTACTTTTATGGAGACTATGTACCAGCGGCTAATAGGGAGACAATTGTCAAAGGAATTGATTTGTTTACTGTTCTGGAGCGTGCAAACCTCCTGGGACCGAATAAGATGGACACACTTCGGATGGGATTTGAAACCATTAATAGAGGAGATTTGATGGAAGAGATCGAAAAACAAGTGGCGCATTTACAGGACGAGTTTAAAGAGGTACAACAGAATATGAAAGAAGAATTGGAAGAATACCAATATGCAGGCTGTTTCATGCAACATGATGGCCCAGGAGATGAAAAGCAAAACACAGATGATATTGAAACTGACAGCTCAGGAGGTGCTAGTTTTGTAATTAGACATGGCAATCCTGTTAAAGGTTTTGATGAGTGTAATATTGAAGATGAGCTACAAGTTGAGATTAGTGATGGAACAACACAAGATACAAAAGACGCTAGCTGCAGTGAGGCTGATGACATTGGTGTGCCAGAAGTAGACAATGTTATCCCAGATGGAAGTGGTAACAATCAACCAGACACCACAAATCATGCAGATAATGAAGAGCCACAGGAACTTTCTAAAACTCCCTCAGAGATTGAAGATGAAGAAACTATGAATACTAAGGGTCAAGTATTTCTCCAAGGTTCTTTGAAACAAGTGACATTCGGGAAGAAGACGTCTGCACCTTCTAGTTCTGATAATGAGTTTGTTAACAAAAAAGAGGATGATGCATCTGGGAAACCACCCTCAGGGGCTAGTAGTGTTACTGATGTTAATCCAACCAGTCATAAAGAGTCTGATTGTGTTAAGCCTAAATTCCATGAAGTACCTTCAATTCTGGAATCAGATGAAGAGCCAAAAAGCAAACATTCAACTCCGAGACCCCAAAACCAACCCTCTGAAGATGGGAGTTCTGTATCTCACCAAGTAGGTAAGATACTTCCAGTGGGTCCGACAGGAAAGGAAAAAGATGGACCTGGTGGGCTGGCATATCCAGACCTTGGTTCACTGATTGGGTTATTGGGTGCAGCTGGGTCCACTGCTTTTCTCCAAGGCAACACAAGTGGTGCCACAAGCTCCTTTGGAACTTTATGGACTGCAGGACATCCAAAAGTTAAACCTTCAGTTGATCAAGACCAACCGTTAAGTTTCCATTGTGATTGCGGAGCTGTGAATATAGGACCTTCACAAATGAATCAACCTGTTTCAGAATTGCAAACAGGATCAATGAACTCTCAAACTATACCAACAGCAGCCAGTAGCACAGGACGACCATCACCCAATTGTACCATTAAAGAAGGATTTCAAGTGGAAATCCCTGAGGGGACGCACGAGAACACTGCTGATGGTGCCAAGGTTATCATGCCTGGAAATGAAATGAAGTTCACCATTATTGTCATCAATAAAAATCAATTTAATGCAGAACTGGACATCAACTATGGTAACGTGTTGTTGGGTTGGTGGGTACTTGAACCTGGTATACCGCTGATCGTGGAGGGTCCATCATATGAGAAAGGAGAACTTTTCTACAGCGCTAATGATGGTTCAGGAAAGGACAAACTGGGATCAAGCCCGAGTAACATTGTTAGGTGTATCTTCAAACCTGATTCTGAGGCAGTAAAAATTAATGTTGAGACAACATACCGTCAAGGAATGGGAAAAGAACGATTTGAAGTTGTTTGGGGGAAACGTCAAAGCTTTCAGACTTTGCAGGAAAATCTTGAACAAAGAATTCGTAAGTCAATTGCTGGGATTGTTGCCCACAATCAGATTCAAGATCCTAGCAAGAAACTGAGTGAGGCTGGAGTAAAATCTGGGGACACAATTCAGGTGCTATTCAGCGAGTTTCGTCTTCTTGTGGAACTACCAGATGGGCAGTTGCTAGACCCGAAAACTTTTGAACCGCTCACTGTAACAGTGGATGATATTAAGTGTTACATACAAGAATACACGAACAAACATCAAAGTTTGCAACGACTTTCCTTTCAAGGAAGAAAAATTACACAAAAGGGAGACCTGATTCCTGTTTTTCTGTCAGAGAATCCTATGATTAAAGTTGAATTTGGAGAGAAGTTAACGCTTCAGGTCAAATATGATGATACGGAAACAGGAAAAATTACGGAAAACACTTTTTCGACAGTAAAAACATTAAAGGACAAAATGGAGCAAAAATATGAAAGCAGTGTTGTTCTGAAAGTCAATGGAGAAATACTTGACGATGAGTCGAAGCTACTTAAAGACTATGGAATAAATAACGATGCAGTTATCGAGGTTGAACAAATGCGGAGTGATGGATCGAGAATGAGGGGCGGTAACTTCGGTGCTTTTGGGTAA

Transcript

c0562.g012.t1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01335	DED	Death effector domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR051290	Family	CASP8 and FADD-like apoptosis regulator	Interproscan
IPR001875	Domain	Death effector domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48169	DED DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan