Detailed information of c0564.g001.t1 in Palythoa umbrosa

Genomic Location: c0564:442...6743
NR annotation: CAH3192429.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q863B3Staphylococcal nuclease domain-containing protein 1 OS=Bos taurus OX=9913 GN=SND1 PE=1 SV=1
Q7KZF4Staphylococcal nuclease domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SND1 PE=1 SV=1
Q5REU4Staphylococcal nuclease domain-containing protein 1 OS=Pongo abelii OX=9601 GN=SND1 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00565SNaseStaphylococcal nuclease homologueDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR016071DomainStaphylococcal nuclease (SNase-like), OB-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12302EBNA2 BINDING PROTEIN P100Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004518Molecular Functionnuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03177truB, PUS4, TRUB1; tRNA pseudouridine55 synthaseEC:5.4.99.25
Transfer RNA biogenesisko03016deepkoala

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