Gene detail

Detailed information of c0615.g007.t1 in Palythoa umbrosa

Genomic Location: c0615:115392...132107
NR annotation: CAH3044694.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0615.g007.t1

ATGGATCAGCGTTTGCTTCTAACACTATTCGCATATCTTCAGTTCGTCGCGACTAAAGGTTCTGCAATTGTGACCGTAACTCCAGTCAGTCAAACCGTTCCAGAAAATAGTTACGTGTCTATACACTGTCGCGTAAATACTTTAGAGAACTTAACGGTTGCTTGGCAGCACCCCAACGGCACCCGACAACCACTGAGAGATGGATATTTAAACATCACATTGATAACAAGGCGTGATGCTGGACAGTACAAATGTGTAGCCACAAATGGCACAAACCAATGGACCGCCAACGCTGTTATAAACGTACACTATGCCCCAGAGATCAGTGTTCAAAAAGTGTTGAAAGTGACAGAAAACAGCGTGGCTCAGTTCAGGTGTAGCGCCACAGGGAACCCATCACCAAATATCTCCTGGACAAGTGCAGCATTGAATCTAACGTGGGACTCGAATTTCAACATCACTAATGTAACAAGAGATAAGTCTGGTACTTTCTACTGCAAAGCTAATAACGGAATAGGAAATGAAGTGGAAAGCTCGGTTGAACTTGATGTTCAGTACAAACCTGAAATTGATAAGAGTTCCACCCGCGGTCCGATTGAGTCATGGAACAGACAGGAGGCTGTTACTCTTAATTGCAAAGCACGAGGAAATCCCCTTCCGCAAGTTACTTGGTATAAAAATGCTACTCGGATGATAAGTGAAAGCCGTAACTCGAGCAGACTAACGTTCAACGCAAGTGCAGACGCAGACTTTGGAAATTACACCTGTAACGCTTCGAATTCACTAGGAGAGGATTTACTTGTTGTTCGTGTGATACGCCGAGAACCTGCTAGAATACACAAGCTGACAAATATCACCGTCACAGAGGGGAGCAAGACAACCCTCAGGTGCAGTGCATCAGGAGACCCGAATTCACAGGTTAACTGGACCTCGCCCGATGGAACACTTATGAAAACCGGAGAAAATGAATGTGTATATGATTTCATTAGAATAAACAGAAAGAAGGCTGGATGGTACTCGTGTTGCGCTTACAATGGATTTGGAGCTGTGGACAGCCAGTCCTTGTTTGTGGACGTTCAGTATAAACCGAAGATCCTTTCAGATGGTTCTAAAATTATTTACGGCCAGCTCCATACCAACATCACTCTTAAATGTGGTGCCGAAGGGAACCCAACACCAACAATAGCGTGGTTTAGAAACGGTGCTTCATTTGGCAAGAATTTTGTTACAAGGGAAAACAAAGCAGAGACGTTTCTCACATTTGCTCTCAACTCAAAAGAGCGCAAAGGAAATTATAGCTGCAAAGCAAGAAACTCTGTAGGAACTGATGTGCAAGTTTTTACCATTATCTTAAATGAGAACAACTTGTATTACTACATTGGTGCAGGAGCTGGAGGAGTTTTGCTACTGGTCTTTGTGGTGCTGATTGTATGTTGCTTGATGAGATGCCAGCGTGATAACGGAAAAGATGACTCTAAAAGGACATCTGGAGTTCTTCCTAGCAGTACACTCAATAGGAGATCTGATAATTATTCGCTGACGGTATACCACCACGATAACACCGAGACGATCGACTCGGCAACGGATGACATTCCAGAAGACGTCAATTACAACGAGTTCTACGTGAATGCACAGGCTATCGCCTCTGCTGAAACCACACCCTACGACTGGGAATATCCCCCAGAGCGGCTGCACGTAGACCGTGTGATTGGGAAAGGCGCTTTTTGTCAAGTGGCCAAGGGATACAGTGACGACCTTGGAGCCGTGGCAGTCAAGATGTTAAAAGCCAACTCACCGGACTCTCATCGTCGCGACTTGTTATCCGAGGTGGAGTTGATGAAGGGCCTTGATCCTCATCCTAACGTAGTTAGATTGTTGGGGGTTATCACCCGATCAGAACCTTTAATGGCAATAGTGGAATATATTCCTTATGGCGACCTGCTTGGTTATCTAAGAAGAAGCCGCGGTTTGAGCGATAATTACTACAAGAATCCTGAATACAAACCTAGAACCTCGCTAACCGCTGAACAGCTACTACGATTTGCCAAACAAACCGCTGATGGAATGGCATTCCTGTCTAAGAATAAGATAATCCACAGAGACTTGGCGGCTCGTAATGTGCTCGTGGGTGGAGGTGAGACCTGCAAAATCACAGATTTTGGAATGGCTCGTGATGTACATGGAGAAGATTTCTATCAGAAGAGAACAAGGGGAAGATTACCGGTCAAATGGACATCGTATGAAGCACTTTGCTATGGCTACTACACTACACAGAGTGACGTGTGGAGTTTTGGTGTTGTTTTATACGAGATATTTACCATTGGTGGCTGCCCATATCCAAACATGGATGGACATAAAATAGCTTATATGTTACAGGAGGGTTACAGAATGGAAAAACCTGCTCATGTGGACAACGAATTATACCAGCTAATGTGTGAATGTTGGACTACAGAACCAGAGAGACGTCCTACATTTGACGATCTAAGTAAAACGCTAGCAAGACTTGCGAATTCTCACAAGCCGCACTTAATGATGAGCAAATATGATGGACAGATTTATGCAAATGTGGACGACCTCGACTAA

Transcript

c0615.g007.t1

Protein

Uniprot

Uniprot term	Description
P11362	Fibroblast growth factor receptor 1 OS=Homo sapiens OX=9606 GN=FGFR1 PE=1 SV=3
P16092	Fibroblast growth factor receptor 1 OS=Mus musculus OX=10090 GN=Fgfr1 PE=1 SV=2
Q90413	Fibroblast growth factor receptor 4 OS=Danio rerio OX=7955 GN=fgfr4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13895	Ig_2	Immunoglobulin domain	Domain	Interproscan
PF07204	Orthoreo_P10	Orthoreovirus membrane fusion protein p10	Family	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR009854	Family	Orthoreovirus membrane fusion p10	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05093	FGFR2, CD332; fibroblast growth factor receptor 2	EC:2.7.10.1	Glycosaminoglycan binding proteins	ko00536	deepkoala