Gene detail

Detailed information of c0809.g007.t2.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: CAH3149742.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q14690	Protein RRP5 homolog OS=Homo sapiens OX=9606 GN=PDCD11 PE=1 SV=3
A7MB10	Protein RRP5 homolog OS=Bos taurus OX=9913 GN=PDCD11 PE=2 SV=1
Q6NS46	Protein RRP5 homolog OS=Mus musculus OX=10090 GN=Pdcd11 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00575	S1	S1 RNA binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003029	Domain	S1 domain	Interproscan
IPR012340	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan
IPR045209	Family	rRNA biogenesis protein Rrp5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23270	PROGRAMMED CELL DEATH PROTEIN 11 PRE-RRNA PROCESSING PROTEIN RRP5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0032040	Cellular Component	small-subunit processome	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03833	selB, EEFSEC; selenocysteine-specific elongation factor	-	Translation factors	ko03012	deepkoala