Gene detail

Detailed information of c0937.g003.t1 in Palythoa umbrosa

Genomic Location: c0937:15944...22676
NR annotation: XP_032225984.2, uncharacterized protein LOC116608999 isoform X1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0937.g003.t1

ATGTCTGatgaagactttaagaaaactttgAAAAAACATTATCAAAGACTAACTCAAGATCTTGAGGTGAATAAAGTGTTGATTCCGTTGTTCCATCGCGAGGTTCTCGATGCAGACGACAAAGAAGAGATCGAAGGAGAACCGTATCGCACTAAAAAAGCTGAGAAATTGCTGGATAAGCTAATGAGAAGGGGAGAAGAAAACATCTTAAAATTTTATGAAGTTTTGGGAGAATTACCTTCGCAAAAGCACTTGGAAAAACTACTTCGCGGACAGACAAATGGAGAAATTGGTAATTTACCAGTTGCGATACAAGAGCAACAGTCCAGTCAGATTGCAAGCAGCCAGCAGCAAGAGTCAAACAGTTCTTCAGCCCATAGCGATATTAAATGCAATCCTCCCAGGTTTATTGGTCGCCAAATCATCTGCAATAGCCTTGTGAAGGCCGTCCTTGATGGTATATTCAGGCTTATCATTCTTGTGGCTCCACCTGGATTTGGGAAGTCAGCTGTTGCTACCGCTGTTGGTGATACACTGCTTGCAAATGGATATCAGGTTGTGGAGTTAAGTCTGAGGAATGTTGAATCTGTAGCCACCCTGGCTGAGAATACCCTTAATGGATTTGGCATGTCAACCAGCCAGTGTGAAGACCCATTAAAAAAGTTAAGAAGATTCCTTAAGGGGGTGACTTGTAAAACTGTCCTTGTTCTAGACAATGCTGAAGACCTTCAAGTACAGGAAAAGACTGAAAAGGACTTTACAGACTTTGTGAAGGGTATTGGGGAAAACATGCCGAATGTCCATGTTTTTATCACCACAAGAAAGAAAATAAGAGGTTTGACAAGATGTAATTTCCAGCACAGGTCATTTCCCCTAGAAGCCTTGAATGATGAAGAATCAGCTGAACTTATGCACCTCCTTGCACCACACATTTCAATGGAGCAAGCTCGCTCACTTGGAAAACACTGTGGTGGTGTACCACTGTTCCTAAATATTGCAGGCTCACTTTTGGAACATGACACCAACCCTGAACCACTAATAAAGGAACTGGAGATGAAGCCGGAGAGATTTCTGAAAGGATCAAACCCTGACATAAAAGATTACCATGACTGTCTTAAAATATTTATTAAGCGgatgagaagtgAGATGAGAAGTGCTTTAACAAGGCTAGCAGTGTTTCCAACTACATTTACTGAAGATGAAGCAAAGATTCTCTTTCCTGATGTGGAACCAGGTTATGAGTTCCATTCACTGCTCATATCCCTGAAGGGTCATGCCTTGCTTCAGTGTCATGATGACACAAAAAAGTTGTACAGTCTTCATCCTTTGGTTCAATTGTTCTGCAAAGTCACCAAAGACGATGTTGAACTTGACACCAGATACAATGTGGCTGAAGAAATATTTATTAAACATTACCTTAAACTTGTGCGAAGCCTTCACCTCCAGTTTATCAGCAAAGAGTCAAAGGAAGCAATCAAGAAGTATGACAAAAACAAAATCAACATCCAGCACGCAATGTTAAGGTCAGTGGAGTGTACTCAAATTGAGCTCCAACAGCTTGGGATCGATGTCTCCACAGAAGTCATTGACTTTCTAGCAAAGGTGCTTAGAATGCACGAATTCCAAAATATTTACCACACAATGAAAGATGTTGCTCGACGGCTTGGAGATGATCAGCGTTATAGTGACTGTCTGACATCCGTAGGTTTTAGGGAGATATGCTACCGTGGTAGGAGGAGTCTCAAGGGTGATGACAACAGAAAGAATCTTGCTACTGCCCACAGAATACAGGAAGAGCTCGGTGGTGACGAGAGAGAGCCTCGGGCCCACTGCCTGTGCAAGTTGGGTGTGCGAGATGTTTATGCTGGCAACGTTGAGCTTGGGGTGCGCAGAATCTCAAGGGGAATCAGGATGAGAAAGAGGCTGGCAGAAAAGGTGCATGGTCCACTTCAACAGATGGAGCTTGCAGCAGGCTACAGTGATTTAGCAGTTGTACTTGATCACCTGGGGAAACACGACGCAGCGATTAATATTTGGCGGAAGAAAACGTTGGTAGTCTATGAGAATCTCCTGAATCATCATCCGTTTACTGCCACGCTGCTTGAATACATTGCAACCTCCATGGCGCAGATTAACTACATCCCGCAAGATGAAGAAGCTATTGGATTCATGCGGCAGTCTTTAGACATGCGCATTAACTTACTGGGTGAGGAGCACTTTGACACTGCCAGAGCGTACTTTGGTCTGGCTCGAGTGTTGAGTAAATTGGGCTACCACAGAGAAGCTGTTAACCACGCTGATCATGCCATCGAGCTGTTTCGTAAAATTCAAGCTACAGATAGGGAAATTGAGAATTCGACGAAGGAGCGAGATGGTATCGAAGAGAAGGCGAAGAAGTTTGAGCGACTTATTCCAACAGTGAAAAGAAGGTTGGAGCAACACTGCGGATATAATCAGTTACAGCCATGCGCACCTCCTTTGTAA

Transcript

c0937.g003.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13401	AAA_22	AAA domain	Domain	Interproscan
PF00619	CARD	Caspase recruitment domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR049945	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan
IPR001315	Domain	CARD domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan