Gene detail

Detailed information of c0937.g006.t1 in Palythoa umbrosa

Genomic Location: c0937:44622...50017
NR annotation: XP_020606603.1, uncharacterized protein LOC110045341 isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

c0937.g006.t1

ATGGCTAGGAGAATGAACAAAGCATTCAAAACGCTTCTTTTTGACATATCAGAAAACCTTACAGAGGATAAACTGGAGAAAATGAAATTTTTGTGTGGCGATAAAATCCCGCCTTTAGAAATTCAGAGACTCAAAACTCCATTGTCCTTACTAAACGCCTTGGTCGACAGTGGACACCTCACGGAAAACGACACAAGTTTTCTGGACGAATTGTTGTCTCAATTACGACTTCACCAACTGCGAACTGACTTGCTTGAGAAATACCAAGAAGCGAATCCCACAACTCATTCGGTGCAGATAACTGAGAAGTATTGTAAAGAACTCCCGGCCAGGGTGAACAACTTTACTGGTAGACAAAAAGATGTTGACGAGGTTAAGAGCCATATAAAGGGACAAGCCCCACGATTGACGGTTATCATTGCCGCCCCTGGATACGGAAAGACAGCCTTAGCAACGGAGATTGGTTATGAGATGTATGACAACGAAAATGTCTCCGTGATATATGTTTCTGCAAGGGAACATCGCTCATTAGAAAGTCTTGCCAAGAATATCCTTGAATGTCTTGGTATAACCCCAGGTAATGATCCAGTGAATCAAGTGCAGTATCAACTGAAGTCCTTACAAGGACAGTCTCTGCTCATTATAGACAACACAGAGGATTTGCAGATAATCGAAGATGAAGGCAAAAAGTTTCTAAGATTTATCGAAAGGTTGTTAAATTCGAACAGCGCCAGTCATTTGGCAGTGATTCTCACTACCAGAAAACCATTTGGTTATTTGCCTTTTGATTATCAAGAGAAGGCACTCGAACCTCTTAGTAAGAACTGGTCAGCAAAACTCCTCGTTCATCTTACGTCTAATAAAAAAGGTGTTGCAGAGATTGGCGAGGACCTTGGAGAAGCCTGCGGGGGAATTCCGCTGTACATCAGAATTGTAGCTTCGTTTATAAAAAAGAGCTACGACCCAGCCAAGTTGCTGGAGAAGTTGAAGAATAATCCTATTGCTGTGCTCGAGATGAAGCACCCAGCCTCCCAAGACTATCACGAATCGTTGTTGAAGTTCCTTCGAGGTTGTTTGGAGGCGGATTTGTTGAGTGCACTCATCCGGGTGGCGGTATTTCCCAAAGATTTTTCAGTCCAGGATGCAACAGTCGTGATTGAAGAACAAGATGACTGTGCAATGCTGCTTCTCAGACTGGTTGAACACGCACTGCTGTATGAAAATGACAATTCATACTCACTTCACCCTCTTATCCAAACACTCTGTAAGAACCGCGCAGAAGCAATTGGCCTTCAAGACGAGGCACTAAATGCTCAGCATTTGTTTAACACACACTACATTGAATTACTTGACCAAACACAGAAACAATTTGTGGAACTGAACAGCTGCGAATTAGCTATCGAGAAATTCAAGCGTAACAAACTGAATATTTTTCAAGCCGTTTACAACAGCTTACAGCCAGAAAAACCGAACGACATCAAAAGTAAATGCGCTTCTGCTTGCCTTGCAGCTACGGATTTTCTTGCCAAGGTATTAACATCGGATGAATTCCACAAAATGTTTTCTCATTGTTGCGAAACCGCTAAAATACTTGAGGACAGAAAGATGTACAGTTATCTTCTTACATCGCTTGGTTTTCGACACATCATAGACAGCGCACATCTCAAGTTAAACCGACTTGCACGAGAAACTTTAGAGCACGCTTACGAGATTCAGAGTGAAGAACTGTCTGACGAGGATCGGTATTGTGAGGAGCATGCGCACTGCATGAGCAAACTTGGTTTGTGTTACGTCATGAGTGGAGAAGAAGAAATGGTCGAGAAAGGAGTCAAGTTCGTTGAGGACGCGATAGAGCTGCGACAAGGACTGAGGAATAAGGTAGCAATAGCTGCTGGATATGGGGAACTGGCAAATACTTACAGGCTTCGGGGAGAGTTTCAGCAGGCGATTCACATCTGGGAATCCGAAACTCTTGCAAGATACATGGACGTTTTGGGCAAGCACCCATTCACTGCTAGCACCCTTAACTGGCTTGGTATATGTTACACCAAGTTAAAACGTTTTGACAAAGCAGCGGAGTACAAAAAGAAAGCACTGCGCATGCGCAAAGATCTTCTTGGCTCAGACCACCAAGATGTCTTGAGATCTGACTTTGAGCTGTCTCAAATCCAGATTGAACAAGGCCATTTGGAGACGGCTCGAGATAGGTTAAAGGACGTTGTGTCACGACAGGAAAAACTTCTCGGGTGCCACCCGCACACAGTAGAAACCTTCAATGCTCTTGAGGTGATATATGATAGGCTTGGTGAGCGACAGGACGCAAATACCATGCGCAAGAAAGCTGAGGGCTATAATTCAGAAATCAGGAAACGCCAAATTGATTATCAGAGACTAAGTTCTGACGAAAAGTAA

Transcript

c0937.g006.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13401	AAA_22	AAA domain	Domain	Interproscan
PF01335	DED	Death effector domain	Domain	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR049945	Domain	ORC1/DEAH AAA+ ATPase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR001875	Domain	Death effector domain	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47691	REGULATOR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0042981	Biological Process	regulation of apoptotic process	Interproscan