Detailed information of c0960.g002.t1 in Palythoa umbrosa

Genomic Location: c0960:5146...29619
NR annotation: KAJ7336037.1, hypothetical protein OS493_013412 [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P58365Cadherin-23 OS=Rattus norvegicus OX=10116 GN=Cdh23 PE=2 SV=1
Q9H251Cadherin-23 OS=Homo sapiens OX=9606 GN=CDH23 PE=1 SV=2
Q99PF4Cadherin-23 OS=Mus musculus OX=10090 GN=Cdh23 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13895Ig_2Immunoglobulin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF01085HH_signalHedgehog amino-terminal signalling domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR009045Homologous_superfamilyHedgehog signalling/DD-peptidase zinc-binding domain superfamilyInterproscan
IPR001657FamilyHedgehog proteinInterproscan
IPR039808FamilyCadherinInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000320DomainHedgehog, N-terminal signalling domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24027CADHERIN-23Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0007267Biological Processcell-cell signalingInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016342Cellular Componentcatenin complexInterproscan
GO:0045296Molecular Functioncadherin bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan
GO:0098742Biological Processcell-cell adhesion via plasma-membrane adhesion moleculesInterproscan

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