Gene detail

Detailed information of c1062.g004.t1 in Palythoa umbrosa

Genomic Location: c1062:18005...20816
NR annotation: XP_044167788.1, uncharacterized protein LOC122951799 [Acropora millepora]

Gene Structure

More details in Jbrowse

Sequence

CDS

c1062.g004.t1

ATGCCTCACTGCTGCATTCCCGAATGCAACAGCAATTGGAAAATGGTCTCAAAATTAAGTTTTCACAAAATTCCGAAAGATTTAAaattgcgaaAAACCTGGCTAGCGAGAATTAGGAGAGAAAATCTTCCTCCGCTCGAAAACTGCAACGTGTGTAGTGAACACTTCACTGATGACTGCTATGAGAAAGACCTGAAATCCCAATTGATGCCAAACACAAAGTTTAAACGAAAGCTTTTACCTGGTTCAGTTCCTTCGCTGTTCAATTTTGGGCTTCCGCCGAAGCAGCCCAGATTAGCTAGCAAGGCTCAGGCGAACAGACACGAATTACAAGAAAAAAGAGAGGAGGTTTTGCAACAAGTTCATAATAGTACTGTTGATAGTCAGAGTGCAAGTAGCAATGAGTTAGAAATAGAACAGTGGACCATTGAGGATCACTCAACTAGCCAGACCCCTATGGATACTTCCTGTATACAAGTAGACACACAGCGTAACTGCAGAGGAGAAACCTTATATAAACAAGTTTACCCTTCAGATGATGAGTCAGTTTCTTCTCCTTTAGCATCAAACTATAGTGATGATTTTAGTAATTTAGATAGTGACTTTACAATCTCTGACAAGGAGGGAACTGATCTAGAAAATTCTGATCAGGAGGAAGAAACTGAGCCCAatcaagagcaaacatttatagtatttcagtcatgtcttcacaatcttctacatttttgtccaagatgtggtggtgttatcttggaagcaaaggagaaaacctgtggtagtatgctatatgtaaccatgcggtgcataaataaccatgatgagtgctgggcatcccaaccagtaattaaaaaagtagctggtggaaacttactcgcatctgctgccattttgtttagtggcaacacatttgctcgcattgcccaatttgcatcatttctcaaattacagttttttagtcagaccacttattataatatacaaagcaagtacttatttccagtggtagacaaagcctggaatgaagaaagagctactgtaatagataatattaagacaaatgggccagtcaacttaattggcgatggaagatgcgacagtcccggtcacaatgccaaatactgtacttacacaattatgtcagaacagggaaaaatagcccatttcagtttagtgcaagtaactgaggttagctcttcgaatgcaatggaaaaggagggttttgagcgctgtattgcgggtttgcaaaatgacagtgtttcaatcaacagaatcactactgaccggcacacatcaatttcaagtgcaatgaacaaagaccataaagacataaagcaccagtacaatgtgtggcatttgtcaaagtggatagtaaaacaactttcaaaaaaggcaaaaaagaaaggatgtgaagagcttttcaattggataaaatctgtgtccaatcatttatggtggtgttctgccacatgtggtggcagtactaaagtccttcgggaaaagtggaagtctatactgtaccacataagcaacaaacacaagtggaatggttacacccactttcatgaatgcactcatccacatcttgatcccactgcatcaaggaaaaagaaatggttgaagcccaacacccctccctacattgctcttgaagaagtggtgttaaacaagaaatttctgaaagatctttcaaaactaacagaattttgccatactggggaggcagaagtttaccactcggaattacttaaatattgtcccaaaagaaagcacttttcttacaaaggcatgacagcaaggtcacagcttgcagcactagaccacaatgccaatacagggagaaagcaagcagtagcagaaactggaccaaacaaaggggaagggagatttaagatcagttttaccaagacacaaaagcagtgggtgacaaaaccaataaaggagaaAAAATCCTACATTCATATTGAAAAATTGTTAGTCAATGTTGTTAAAGCTTGTGGTGCTGGAAAGGCATATCATCAACCTGAAGAAAAAAACATTCCTAaaaacattGCCAAGGCTGCTGCTCCAAGCAAACAAGAATTTGTCCAAGCACTGAAGTCGAGATTTAATAATTAA

Transcript

c1062.g004.t1

Protein

Uniprot

Uniprot term	Description
B5XCB8	THAP domain-containing protein 1 OS=Salmo salar OX=8030 GN=thap1 PE=2 SV=1
Q1JPT7	THAP domain-containing protein 1 OS=Danio rerio OX=7955 GN=thap1 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05485	THAP	THAP domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006612	Domain	THAP-type zinc finger	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31751	SI:CH211-108C17.2-RELATED-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26957	GCNA, ACRC; germ cell nuclear acidic protein	-	DNA repair and recombination proteins	ko03400	deepkoala