Gene detail

Detailed information of c1120.g006.t1 in Palythoa umbrosa

Genomic Location: c1120:66120...70327
NR annotation: UST29446.1, 17 beta-hydroxysteroid dehydrogenase 13 [Haliclona caerulea]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7T2D1	Retinol dehydrogenase 10-B OS=Danio rerio OX=7955 GN=rdh10b PE=2 SV=2
Q6DCT3	Retinol dehydrogenase 10-A OS=Xenopus laevis OX=8355 GN=rdh10-a PE=2 SV=1
Q7TQA3	Epidermal retinol dehydrogenase 2 OS=Mus musculus OX=10090 GN=Sdr16c5 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00106	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002347	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR020904	Conserved_site	Short-chain dehydrogenase/reductase, conserved site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24322	PKSB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15734	SDR16C5; all-trans-retinol dehydrogenase (NAD+)	EC:1.1.1.105	Retinol metabolism	ko00830	deepkoala