Detailed information of c1218.g001.t1 in Palythoa umbrosa

Genomic Location: c1218:137...14330
NR annotation: XP_020892042.1, E3 ubiquitin-protein ligase MIB2 isoform X1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5ZIJ9E3 ubiquitin-protein ligase MIB2 OS=Gallus gallus OX=9031 GN=MIB2 PE=2 SV=1
Q68LP1E3 ubiquitin-protein ligase MIB2 OS=Rattus norvegicus OX=10116 GN=Mib2 PE=1 SV=2
Q8R516E3 ubiquitin-protein ligase MIB2 OS=Mus musculus OX=10090 GN=Mib2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF06701MIB_HERC2Mib_herc2DomainInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF18346SH3_15Mind bomb SH3 repeat domainDomainInterproscan
PF00569ZZZinc finger, ZZ typeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000433DomainZinc finger, ZZ-typeInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR010606DomainMib-herc2Interproscan
IPR037252Homologous_superfamilyMib/herc2 domain superfamilyInterproscan
IPR040847DomainMind bomb, SH3 repeat domainInterproscan
IPR043145Homologous_superfamilyZinc finger, ZZ-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24202E3 UBIQUITIN-PROTEIN LIGASE MIB2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

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