Detailed information of c1222.g005.t2.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: XP_003886398.1, putative double-strand break repair protein [Neospora caninum Liverpool]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q25AA3Double-strand break repair protein MRE11 OS=Oryza sativa subsp. indica OX=39946 GN=H0410G08.11 PE=3 SV=1
Q7XQR9Double-strand break repair protein MRE11 OS=Oryza sativa subsp. japonica OX=39947 GN=MRE11 PE=1 SV=2
Q9XGM2Double-strand break repair protein MRE11 OS=Arabidopsis thaliana OX=3702 GN=MRE11 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04152Mre11_DNA_bindMre11 DNA-binding presumed domain DomainInterproscan
PF00149MetallophosCalcineurin-like phosphoesteraseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003701FamilyDNA double-strand break repair protein Mre11Interproscan
IPR007281DomainMre11, DNA-bindingInterproscan
IPR029052Homologous_superfamilyMetallo-dependent phosphatase-likeInterproscan
IPR038487Homologous_superfamilyMre11, capping domainInterproscan
IPR041796DomainMre11 nuclease, N-terminal metallophosphatase domainInterproscan
IPR004843DomainCalcineurin-like phosphoesterase domain, ApaH typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10139DOUBLE-STRAND BREAK REPAIR PROTEIN MRE11Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004520Molecular FunctionDNA endonuclease activityInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0008296Molecular Function3'-5'-DNA exonuclease activityInterproscan
GO:0030870Cellular ComponentMre11 complexInterproscan
GO:0004519Molecular Functionendonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0030145Molecular Functionmanganese ion bindingInterproscan
GO:0000014Molecular Functionsingle-stranded DNA endodeoxyribonuclease activityInterproscan
GO:0000723Biological Processtelomere maintenanceInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0007095Biological Processmitotic G2 DNA damage checkpoint signalingInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0042138Biological Processmeiotic DNA double-strand break formationInterproscan
GO:0097552Biological Processmitochondrial double-strand break repair via homologous recombinationInterproscan
GO:0016787Molecular Functionhydrolase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10865MRE11; double-strand break repair protein MRE11-DNA repair and recombination proteinsko03400deepkoala

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