Detailed information of c1237.g006.t1 in Palythoa umbrosa

Genomic Location: c1237:55775...61547
NR annotation: CAH3138536.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q3UIR3E3 ubiquitin-protein ligase DTX3L OS=Mus musculus OX=10090 GN=Dtx3l PE=1 SV=1
Q8N9I9Probable E3 ubiquitin-protein ligase DTX3 OS=Homo sapiens OX=9606 GN=DTX3 PE=1 SV=2
Q80V91Probable E3 ubiquitin-protein ligase DTX3 OS=Mus musculus OX=10090 GN=Dtx3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07292NIDNmi/IFP 35 domain (NID)DomainInterproscan
PF18102DTCDeltex C-terminal domainDomainInterproscan
PF13639zf-RING_2Ring finger domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR009909DomainNmi/IFP 35 domainInterproscan
IPR039399Homologous_superfamilyDeltex, C-terminal domain superfamilyInterproscan
IPR039398FamilyDeltex familyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR039396DomainDeltex, C-terminalInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12622DELTEX-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005654Cellular ComponentnucleoplasmInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0061630Molecular Functionubiquitin protein ligase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06058DTX; deltexEC:2.3.2.27
Ubiquitin systemko04121deepkoala

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