Gene detail

Detailed information of c1242.g001.t1 in Palythoa umbrosa

Genomic Location: c1242:1413...1654
NR annotation: CAH3176194.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q6IWL4	TNF receptor-associated factor 6 OS=Danio rerio OX=7955 GN=traf6 PE=1 SV=2
Q3MV19	TNF receptor-associated factor 6-A OS=Xenopus laevis OX=8355 GN=traf6-a PE=1 SV=1
Q6DJN2	TNF receptor-associated factor 6-B OS=Xenopus laevis OX=8355 GN=traf6-b PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR049627	Family	E3 ubiquitin-protein ligase complex SLX5-SLX8 subunit SLX8	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47094	ELFLESS, ISOFORM B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0140082	Molecular Function	SUMO-ubiquitin ligase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09690	wzm, rfbA; homopolymeric O-antigen transport system permease protein	-	Transporters	ko02000	deepkoala