Gene detail

Detailed information of c1317.g005.t1 in Palythoa umbrosa

Genomic Location: c1317:54461...67738
NR annotation: XP_020605786.1, cysteine--tRNA ligase, cytoplasmic-like [Orbicella faveolata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q5F408	Cysteine--tRNA ligase, cytoplasmic OS=Gallus gallus OX=9031 GN=CARS1 PE=2 SV=1
Q4R550	Cysteine--tRNA ligase, cytoplasmic OS=Macaca fascicularis OX=9541 GN=CARS1 PE=2 SV=1
Q5M7N8	Cysteine--tRNA ligase, cytoplasmic OS=Xenopus tropicalis OX=8364 GN=cars1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01406	tRNA-synt_1e	tRNA synthetases class I (C) catalytic domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014729	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR024909	Family	Cysteinyl-tRNA synthetase/mycothiol ligase	Interproscan
IPR032678	Domain	tRNA synthetases class I, catalytic domain	Interproscan
IPR015803	Family	Cysteine-tRNA ligase	Interproscan
IPR009080	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10890	CYSTEINYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004817	Molecular Function	cysteine-tRNA ligase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006423	Biological Process	cysteinyl-tRNA aminoacylation	Interproscan
GO:0000166	Molecular Function	nucleotide binding	Interproscan
GO:0004812	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418	Biological Process	tRNA aminoacylation for protein translation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01883	CARS, cysS; cysteinyl-tRNA synthetase	EC:6.1.1.16	Transfer RNA biogenesis	ko03016	deepkoala