Gene detail

Detailed information of c1334.g003.t1 in Palythoa umbrosa

Genomic Location: c1334:46058...59209
NR annotation: CAH3196627.1, unnamed protein product, partial [Porites evermanni]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q9TU53	Cubilin OS=Canis lupus familiaris OX=9615 GN=CUBN PE=1 SV=1
O70244	Cubilin OS=Rattus norvegicus OX=10116 GN=Cubn PE=1 SV=2
F1RWC3	Cubilin OS=Sus scrofa OX=9823 GN=CUBN PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan
PF00431	CUB	CUB domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR000859	Domain	CUB domain	Interproscan
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR023415	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR035914	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR050841	Family	Developmental metalloproteases and endocytic receptors	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24251	OVOCHYMASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan