Detailed information of c1393.g001.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: PHJ23013.1, transcription elongation factor [Cystoisospora suis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q62383Transcription elongation factor SPT6 OS=Mus musculus OX=10090 GN=Supt6h PE=1 SV=2
Q7KZ85Transcription elongation factor SPT6 OS=Homo sapiens OX=9606 GN=SUPT6H PE=1 SV=2
A8MS85Transcription elongation factor SPT6 homolog OS=Arabidopsis thaliana OX=3702 GN=SPT6 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14635HHH_7Helix-hairpin-helix motif DomainInterproscan
PF14633SH2_2SH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR037027Homologous_superfamilyYqgF/RNase H-like domain superfamilyInterproscan
IPR036860Homologous_superfamilySH2 domain superfamilyInterproscan
IPR042066Homologous_superfamilySpt6, Death-like domainInterproscan
IPR023319Homologous_superfamilyTex-like protein, HTH domain superfamilyInterproscan
IPR032706DomainTranscription elongation factor Spt6, helix-hairpin-helix motifInterproscan
IPR010994Homologous_superfamilyRuvA domain 2-likeInterproscan
IPR023323Homologous_superfamilyTex-like domain superfamilyInterproscan
IPR035420DomainSpt6, SH2 domainInterproscan
IPR017072FamilyTranscription elongation factor Spt6Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006139Biological Processnucleobase-containing compound metabolic processInterproscan
GO:0006368Biological Processtranscription elongation by RNA polymerase IIInterproscan
GO:0008023Cellular Componenttranscription elongation factor complexInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0034728Biological Processnucleosome organizationInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0140673Biological Processtranscription elongation-coupled chromatin remodelingInterproscan

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