Detailed information of c1422.g002.t1 in Palythoa umbrosa

Genomic Location: c1422:14527...34442
NR annotation: CAH3175508.1, unnamed protein product [Porites lobata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q63406Guanine nucleotide exchange factor DBS OS=Rattus norvegicus OX=10116 GN=Mcf2l PE=1 SV=3
O15068Guanine nucleotide exchange factor DBS OS=Homo sapiens OX=9606 GN=MCF2L PE=1 SV=2
Q64096Guanine nucleotide exchange factor DBS OS=Mus musculus OX=10090 GN=Mcf2l PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00169PHPH domainDomainInterproscan
PF13716CRAL_TRIO_2Divergent CRAL/TRIO domainDomainInterproscan
PF00621RhoGEFRhoGEF domainDomainInterproscan
PF00018SH3_1SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001452DomainSH3 domainInterproscan
IPR018159RepeatSpectrin/alpha-actininInterproscan
IPR001849DomainPleckstrin homology domainInterproscan
IPR051336FamilyRho GTPase-activating Guanine Nucleotide Exchange FactorsInterproscan
IPR000219DomainDbl homology (DH) domainInterproscan
IPR001251DomainCRAL-TRIO lipid binding domainInterproscan
IPR035899Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036865Homologous_superfamilyCRAL-TRIO lipid binding domain superfamilyInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22826RHO GUANINE EXCHANGE FACTOR-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K20685MCF2, ARHGEF14_21_22; guanine nucleotide exchange factor MCF2-Membrane traffickingko04131deepkoala

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