Gene detail

Detailed information of c1571.g003.t1.p1 in Palythoa mizigama

Genomic Location: not available for this species
NR annotation: XP_002764512.1, arginyl-tRNA synthetase, putative, partial [Perkinsus marinus ATCC 50983]
Species abbreviation PMIZI · all data for this species · gene families

Sequence

No sequence record for c1571.g003.t1.p1 in PMIZI (the gene ID may belong to a different isoform naming scheme). Try the gene search.

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B2J6I0	Arginine--tRNA ligase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=argS PE=3 SV=1
Q3M769	Arginine--tRNA ligase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=argS PE=3 SV=1
O23247	Arginine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=EMB1027 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004979 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05746 all species →	DALR_1	DALR anticodon binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014729 all species →	Homologous_superfamily	Rossmann-like alpha/beta/alpha sandwich fold	Interproscan
IPR008909 all species →	Domain	DALR anticodon binding	Interproscan
IPR001278 all species →	Family	Arginine-tRNA ligase	Interproscan
IPR009080 all species →	Homologous_superfamily	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11956 all species →	ARGINYL-TRNA SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004814 all species →	Molecular Function	arginine-tRNA ligase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006420 all species →	Biological Process	arginyl-tRNA aminoacylation	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0004812 all species →	Molecular Function	aminoacyl-tRNA ligase activity	Interproscan
GO:0006418 all species →	Biological Process	tRNA aminoacylation for protein translation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for c1571.g003.t1.p1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.