Gene detail

Detailed information of c1587.g001.t1 in Palythoa umbrosa

Genomic Location: c1587:4689...19176
NR annotation: XP_032225296.1, protein quaking isoform X5 [Nematostella vectensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6P0D0	Protein quaking-A OS=Danio rerio OX=7955 GN=qkia PE=2 SV=2
O01367	Protein held out wings OS=Drosophila melanogaster OX=7227 GN=how PE=1 SV=1
G5EFF1	RNA-binding protein asd-2 OS=Caenorhabditis elegans OX=6239 GN=asd-2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16544	STAR_dimer	Homodimerisation region of STAR domain protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036612	Homologous_superfamily	K Homology domain, type 1 superfamily	Interproscan
IPR045071	Family	KH domain-containing BBP-like	Interproscan
IPR004087	Domain	K Homology domain	Interproscan
IPR032377	Domain	STAR protein, homodimerisation region	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11208	RNA-BINDING PROTEIN RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0003729	Molecular Function	mRNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0048024	Biological Process	regulation of mRNA splicing, via spliceosome	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14945	QKI; protein quaking	-	Spliceosome	ko03041	deepkoala