Detailed information of c1588.g006.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: XP_029215955.1, SWI2/SNF2 ISWI-like SANT [Besnoitia besnoiti]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7G8Y3Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0367900 PE=2 SV=2
Q8RWY3ISWI chromatin-remodeling complex ATPase CHR11 OS=Arabidopsis thaliana OX=3702 GN=CHR11 PE=1 SV=4
F4JY24ISWI chromatin-remodeling complex ATPase CHR17 OS=Arabidopsis thaliana OX=3702 GN=CHR17 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09111SLIDESLIDEDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR017884DomainSANT domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR015195DomainSLIDE domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036306Homologous_superfamilyISWI, HAND domain superfamilyInterproscan
IPR001005DomainSANT/Myb domainInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10799SNF2/RAD54 HELICASE FAMILYInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0031491Molecular Functionnucleosome bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11654SMARCA5, SNF2H, ISWI; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5EC:5.6.2.-
Chromosome and associated proteinsko03036deepkoala

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