Detailed information of c1624.g002.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: KAF8819796.1, SWI2/SNF2-containing protein RAD5 [Cardiosporidium cionae]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9FIY7DNA repair protein RAD5B OS=Arabidopsis thaliana OX=3702 GN=RAD5B PE=3 SV=1
Q9FNI6DNA repair protein RAD5A OS=Arabidopsis thaliana OX=3702 GN=RAD5A PE=1 SV=1
P36607DNA repair protein rad8 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rad8 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF13445zf-RING_UBOXRING-type zinc-fingerDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR050628FamilySNF2/RAD54 Helicase and Transcription FactorInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR027370DomainZinc finger, RING-type, eukaryoticInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45626TRANSCRIPTION TERMINATION FACTOR 2-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

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