Gene detail

Detailed information of c1624.g002.t2.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: KAF8819796.1, SWI2/SNF2-containing protein RAD5 [Cardiosporidium cionae]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q9FNI6	DNA repair protein RAD5A OS=Arabidopsis thaliana OX=3702 GN=RAD5A PE=1 SV=1
Q9FIY7	DNA repair protein RAD5B OS=Arabidopsis thaliana OX=3702 GN=RAD5B PE=3 SV=1
Q5BHD6	DNA repair protein rad5 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=rad5 PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF00176	SNF2-rel_dom	SNF2-related domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR038718	Homologous_superfamily	SNF2-like, N-terminal domain superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR050628	Family	SNF2/RAD54 Helicase and Transcription Factor	Interproscan
IPR000330	Domain	SNF2, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45626	TRANSCRIPTION TERMINATION FACTOR 2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0008094	Molecular Function	ATP-dependent activity, acting on DNA	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0140658	Molecular Function	ATP-dependent chromatin remodeler activity	Interproscan