Detailed information of c1685.g001.t1 in Palythoa umbrosa

Genomic Location: c1685:8194...38401
NR annotation: XP_027058976.1, uncharacterized protein LOC113685645 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B3EWZ5MAM and LDL-receptor class A domain-containing protein 1 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
B3EWZ6MAM and LDL-receptor class A domain-containing protein 2 (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1
Q91641Thyroid hormone-induced protein B OS=Xenopus laevis OX=8355 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001759FamilyPentraxin-relatedInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR000998DomainMAM domainInterproscan
IPR000859DomainCUB domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR051560FamilyMAM domain-containing proteinInterproscan
IPR037524DomainPA14/GLEYA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23282APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0030246Molecular Functioncarbohydrate bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

TOP