Gene detail

Detailed information of c1709.g001.t1 in Palythoa umbrosa

Genomic Location: c1709:20506...36763
NR annotation: CAH3170094.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

c1709.g001.t1

ATGTCAATTAAAAAGTGCCCTTTTCTGATTGCAGAATTTCACCCTTCATATTATTCAGCAGTAAATTTCTGGCCTTTTGATCGCAATACGAACTTAAAGGACATTCGTACTAATAAAACTGCACGTCTCTACGGACTAATGAAGAGCATAAAATTTTCGGGACCTGGTAAAGGATTCCTACAAAATCGCGGTAAAGCCTACGTAATTATGGGAGACTATAGTGGTGATTGCCTCGCTGAGCCACAAAGATGTCAAGCAGCCCTTACAGTAAGCTTCTGGTTTAGGTATCCTTCCAGCAAGATCTACAAGAAAGAGGTGTATCTTGGCACAGCTAGTCTTAGAGAAAACTCGCAAGGTTTTGCTCTCTATATGGATCCTATAGATAAGAAAACCAGCAGATTTGCTGTTAAAGTAAGCGACGGCAAAAAGATATGGCAATGTAATTTTAAACAGCCGCCTGAGATTTGGGTTCATCTTGGTTTTGTTTGGAAGGCGAAAACCGGATTGATGTTGTACAAAGACTGCAGCTTAACTTGTACAAACGGCAGTGGCGTTAGCATTATCACTCCAACTACAAAAGAAATATCGAATCTGTACGCATCTTATTTTTATCTTGGACGAGGAAACGAACGTGGTGTATTTAAGGACACGAAAGCGTCATTTGATGATCTAGCTGTGTGGTACCAAAAACTTCGGGTTAAAGAAATGGCTGGTGATATCTGCAGATACAAATTAGAACCACCGGAAATCCTGTCTATCTGTAAAAGTACATTGACGTCACTTAAAATATCATGGACTCTACCGGTCTACACTTATGACAAGCTCAGAGGGACCAGGATTTACCACAGAGAGCTGTTTGGTGCCCGGTGGAAAACCCGCGACGTTAATACTACCAACACCACGTCCATGAACTTCACAGATCTAGCACCTTTTACATACCACGAGTTTCGAGTCCAAAACAAGCTTGCAAGAGGATACGGAAGAACAGGAGAGAGAACTGTTTGTCGCGTAACAGATGCGACAAAGAGCTTGGACCTGAGTCTGGTTTCAAAAACCACCAATTCCCTCACCCTTTCCTGGAGCCCACCTAGAGAAGGTCAAGACATGGTAGAAAAGTATATGATTAAATTCAAACTCAACGGAACTTGGGACGACTTCAGGCTGGAAAACGCAGGCAAAAATAAAACTGAACGAATCAGAAAGTTGCAGCCAAACAGCCAATATGTTATACAACTAATTGCCGTTGGAAAAACACTCAAGCCCATTGCTGCTGTGGAAAAGTTCTTTACAACGTCAAAGATAGAGTTGGGAAGACCGTCACTTGTGAAAGAAGAAGGTCGTTCGTCATCGGCTGTGTTAGTCACATGGTCGCCACCCACAACACACGCTGATAAGGTTAAAGGATACAAGATTATGTACAGACAAAAGGACTCAGGCAAACGTATAGTTTCCTATGACGTTGGGAATGTGACGTCATTTCTGATAACAGATCTCAAAACCAACACGAAATACGAAGTAAAGCTGATTTCGTATGGGAATAAACAAGTCCTTCCCAGTCGTCCTCGGTCGAAAATCATGAGAACAGATGTAGATGATTCCCTCACAGCTCAGTACAATAAGGCTGTACCAACATCTCCCGATACCGTTTCTGTCATATGGAAACGTCCAGCCAAGAAATTCATGGAATTTAAATACCGTGTGTATTTAAAGTGGAAGGTAAAAAAGCGCTGGTATTTCAAAGAAGTTTGCTACAAGGCAAAGTTCCCCAACTGCACTGCGTCTGTGAAGACCATTCCCTTTCCTCACTCTTTCTTCGTCATATCGTGGATTATGAAAGACTTAACGCCCCCTCCAGTTACTGCACCTGTTAGAAATATCACGGTTACGCAAAGGCTGTGGAATAAAGTTACGTTGTCATGGAAAGAACCAGTTACCGCCAAGGGAAAACGTTTCTCGTTTCTTAAATATATGATTTACTTGAAGCATGAAAACGGAATGGAAAATATAACCACGAAGAAGACAGAAATAGAGCTCAACGGGTTACACGAATTGAAGCAATATGAAGCACAAATCAGACCTTTGAATCCTGGCGGTGAAGGACCATTGTCGAGAAAAGTTGGTTTTACAACACCTGCACGCGATTTTTGTATCGAGAAAAGAAACTGTCACAAAGAGGCAGTTTGTATTCCATCTGCTGGTTCGTACTTGTGTAAGTGCATGACAGGTTATATCGGAGatgggattacgtgttcggGTCTGCCTGCTGATGCTACGGTTGAAGACTTCTGTCCAAGGGAAGAGTGTGCTGGGGTGGTCTGGGAAAAGACCTTCAAAGGAACAACAGACAGAAACGTCTGTCCTGGAGACACTCGCGGAATTGCATCGCGAAAATGCCGCCAAACAAGGGACGGGCGATCTTCCTGGTCGGTACCAGATCTCAGTAATTGCGTCTCCAATTGGATGACAGAGATTTATATGCAGTTACAAAGTACAACGATCGACACAAGTTTGGTGGCCATTCATCTTGCAAATGTAACCAGCTCGGACTCAGGAAAGAAAGTTTATCCAGGTGATCTCCTCGAGGCAGTGAATGCGGTTGGTGTATTGGCCAAAAAAGGTTTTAGTAGTAGTGACACAACAAAAAATCCTGAGAAGTCCAAGAAGTTTTCAAAGGCCGTGTTTTTGACAGCCAGTAACATACTTGACTCTACAAAACAGGAAAACTGGAATTACGTGCCAAAGGCAACAAAAGCGAGAAGTGCAGGGGATCTCATAAAGAGTCTAGATACAGTCAGTCTGGAGTTAGTGAGTCGTGTGAACGATACAGGGACAACAACGGCCAACATTGAAATGAAGGTTAAAACTATTGATGCCAAAACGAAGGAGAACGTTTTGAAAATCAGGGAGGATAATGGTAACAGCAAGTCTCCTGCCAGCACGGTCATCTTTCCTGAGTCAGTAATAGCACCAGATGAAGCTAAAGAAGCACCGCAATACTTAACATATGTTAATTTTAAGAGCATCGGATCTTTGATGGAGCCTTCGCAAGCAAGGTCCGGGCAGTCCGTGAATTCCCCAGTAGTCTCTCTAGCTCTGATTCCTCTTATTAGGAAACCGTTCCGTGAAGCCGTGAAAATAGTATTACGTCATAAAAAGGTTGAAGGGAGAGCTGAACCAAACTGTGTGTTCTGGAACACCTCAAGGAGTCCTGGGTTTTGGTCTGACGAAGGTTGTGACGTATACAGAACAAATGAGACGCACACGGAATGCCACTGCTATCATCTAACCAGCTTTGCTGTACTTATGGCTGTGGAAAATCAGGCCGTAGCAGCTATCAAG

Transcript

c1709.g001.t1

Protein

Uniprot

Uniprot term	Description
Q91ZE5	Adhesion G protein-coupled receptor E4 OS=Mus musculus OX=10090 GN=Adgre4 PE=1 SV=1
Q59I63	Adhesion G-protein coupled receptor G1 OS=Danio rerio OX=7955 GN=adgrg1 PE=1 SV=2
Q86SQ3	Putative adhesion G protein-coupled receptor E4P OS=Homo sapiens OX=9606 GN=ADGRE4P PE=5 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13385	Laminin_G_3	Concanavalin A-like lectin/glucanases superfamily	Domain	Interproscan
PF01825	GPS	GPCR proteolysis site, GPS, motif	Motif	Interproscan
PF16489	GAIN	GPCR-Autoproteolysis INducing (GAIN) domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF12947	EGF_3	EGF domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR013320	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR036445	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR001879	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR000203	Conserved_site	GPS motif	Interproscan
IPR032471	Domain	GAIN domain, N-terminal	Interproscan
IPR024731	Domain	EGF domain	Interproscan
IPR051587	Family	Adhesion G-protein coupled receptor	Interproscan
IPR046338	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45813	EF-HAND DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0007189	Biological Process	adenylate cyclase-activating G protein-coupled receptor signaling pathway	Interproscan