Detailed information of c2449.g001.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: CEM08823.1, unnamed protein product [Vitrella brassicaformis CCMP3155]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P53799Squalene synthase 1 OS=Arabidopsis thaliana OX=3702 GN=SQS1 PE=1 SV=1
O48666Squalene synthase 1 OS=Panax ginseng OX=4054 GN=SS1 PE=2 SV=1
P53800Squalene synthase OS=Nicotiana benthamiana OX=4100 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00494SQS_PSYSqualene/phytoene synthaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019845Conserved_siteSqualene/phytoene synthase, conserved siteInterproscan
IPR033904DomainTrans-isoprenyl diphosphate synthases, head-to-headInterproscan
IPR002060FamilySqualene/phytoene synthaseInterproscan
IPR044844FamilyTrans-isoprenyl diphosphate synthases, eukaryotic-typeInterproscan
IPR006449FamilySqualene synthase-likeInterproscan
IPR008949Homologous_superfamilyIsoprenoid synthase domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11626FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016765Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0004311Molecular Functionfarnesyltranstransferase activityInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0004310Molecular Functionobsolete farnesyl-diphosphate farnesyltransferase activityInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0045338Biological Processfarnesyl diphosphate metabolic processInterproscan
GO:0051996Molecular Functionsqualene synthase [NAD(P)H] activityInterproscan
GO:0008610Biological Processlipid biosynthetic processInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00801FDFT1; farnesyl-diphosphate farnesyltransferaseEC:2.5.1.21
Prenyltransferasesko01006deepkoala

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