Gene detail

Detailed information of c2461.g002.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: XP_976809.1, U4/U6 small nuclear ribonucleoprotein Prp4 [Tetrahymena thermophila SB210]

Gene Structure

Sequence

Gene family

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan
PF08799	PRP4	pre-mRNA processing factor 4 (PRP4) like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR036285	Homologous_superfamily	PRP4-like superfamily	Interproscan
IPR014906	Domain	Pre-mRNA processing factor 4 (PRP4)-like	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19846	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000398	Biological Process	mRNA splicing, via spliceosome	Interproscan
GO:0017070	Molecular Function	U6 snRNA binding	Interproscan
GO:0030621	Molecular Function	U4 snRNA binding	Interproscan
GO:0046540	Cellular Component	U4/U6 x U5 tri-snRNP complex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11804	DCAF8; DDB1- and CUL4-associated factor 8	-	Ubiquitin system	ko04121	deepkoala