Gene detail

Detailed information of c2541.g001.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: KAF8822961.1, U2 snRNP auxilliary factor, large subunit, splicing factor subfamily protein [Cardiosporidium cionae]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q2QKB4	Splicing factor U2af large subunit B OS=Triticum aestivum OX=4565 GN=U2AF65B PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00076	RRM_1	RNA recognition motif	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012677	Homologous_superfamily	Nucleotide-binding alpha-beta plait domain superfamily	Interproscan
IPR035979	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR000504	Domain	RNA recognition motif domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23139	RNA-BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000243	Cellular Component	commitment complex	Interproscan
GO:0008187	Molecular Function	poly-pyrimidine tract binding	Interproscan
GO:0016607	Cellular Component	nuclear speck	Interproscan
GO:0030628	Molecular Function	pre-mRNA 3'-splice site binding	Interproscan
GO:0071004	Cellular Component	U2-type prespliceosome	Interproscan
GO:0089701	Cellular Component	U2AF complex	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan