Detailed information of c2701.g008.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: MCB0077257.1, tRNA pseudouridine(55) synthase TruB [Anaerolineales bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3ZXU5tRNA pseudouridine synthase B OS=Dehalococcoides mccartyi (strain CBDB1) OX=255470 GN=truB PE=3 SV=1
A5FQR4tRNA pseudouridine synthase B OS=Dehalococcoides mccartyi (strain ATCC BAA-2100 / JCM 16839 / KCTC 5957 / BAV1) OX=216389 GN=truB PE=3 SV=1
Q01SZ5tRNA pseudouridine synthase B OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=truB PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01509TruB_NTruB family pseudouridylate synthase (N terminal domain)FamilyInterproscan
PF16198TruB_C_2tRNA pseudouridylate synthase B C-terminal domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002501DomainPseudouridine synthase II, N-terminalInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR032819DomaintRNA pseudouridylate synthase B, C-terminalInterproscan
IPR014780FamilytRNA pseudouridine synthase II, TruBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13767TRNA-PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006396Biological ProcessRNA processingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006400Biological ProcesstRNA modificationInterproscan
GO:1990481Biological ProcessmRNA pseudouridine synthesisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03177truB, PUS4, TRUB1; tRNA pseudouridine55 synthaseEC:5.4.99.25
Transfer RNA biogenesisko03016deepkoala

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