Gene detail

Detailed information of c2821.g003.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: KAF8820711.1, tRna pseudouridine synthase, partial [Cardiosporidium cionae]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q4KM92	Pseudouridylate synthase 1 homolog OS=Rattus norvegicus OX=10116 GN=Pus1 PE=1 SV=2
Q9WU56	Pseudouridylate synthase 1 homolog OS=Mus musculus OX=10090 GN=Pus1 PE=1 SV=2
Q9Y606	Pseudouridylate synthase 1 homolog OS=Homo sapiens OX=9606 GN=PUS1 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01416	PseudoU_synth_1	tRNA pseudouridine synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020097	Domain	Pseudouridine synthase I, TruA, alpha/beta domain	Interproscan
IPR020103	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR020095	Homologous_superfamily	Pseudouridine synthase I, TruA, C-terminal	Interproscan
IPR001406	Family	Pseudouridine synthase I, TruA	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11142	PSEUDOURIDYLATE SYNTHASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0001522	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0009451	Biological Process	RNA modification	Interproscan
GO:0009982	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0031119	Biological Process	tRNA pseudouridine synthesis	Interproscan
GO:1990481	Biological Process	mRNA pseudouridine synthesis	Interproscan