Gene detail

Detailed information of c3028.g004.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: MBA3531164.1, LysM peptidoglycan-binding domain-containing protein [Ardenticatenales bacterium]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P0ABQ3	2-hydroxy-3-oxopropionate reductase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=garR PE=3 SV=1
P0ABQ2	2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) OX=83333 GN=garR PE=1 SV=1
P77161	2-hydroxy-3-oxopropionate reductase OS=Escherichia coli (strain K12) OX=83333 GN=glxR PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14833	NAD_binding_11	NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase	Domain	Interproscan
PF03446	NAD_binding_2	NAD binding domain of 6-phosphogluconate dehydrogenase	Domain	Interproscan
PF01476	LysM	LysM domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036779	Homologous_superfamily	LysM domain superfamily	Interproscan
IPR029154	Domain	3-hydroxyisobutyrate dehydrogenase-like, NAD-binding domain	Interproscan
IPR006115	Domain	6-phosphogluconate dehydrogenase, NADP-binding	Interproscan
IPR011055	Homologous_superfamily	Duplicated hybrid motif	Interproscan
IPR002204	Conserved_site	3-hydroxyisobutyrate dehydrogenase-related, conserved site	Interproscan
IPR018392	Domain	LysM domain	Interproscan
IPR013328	Homologous_superfamily	6-phosphogluconate dehydrogenase, domain 2	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43060	3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0051287	Molecular Function	NAD binding	Interproscan
GO:0050661	Molecular Function	NADP binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01968	MCCC1, accA1; 3-methylcrotonyl-CoA carboxylase alpha subunit	EC:6.4.1.4	Valine, leucine and isoleucine degradation	ko00280	deepkoala