Gene detail

Detailed information of c3302.g002.t1.p1 in Palythoa mizigama

Genomic Location: :...
NR annotation: KAF8819764.1, SWIRM domain-containing protein [Cardiosporidium cionae]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P97496	SWI/SNF complex subunit SMARCC1 OS=Mus musculus OX=10090 GN=Smarcc1 PE=1 SV=2
Q92922	SWI/SNF complex subunit SMARCC1 OS=Homo sapiens OX=9606 GN=SMARCC1 PE=1 SV=3
Q6PDG5	SWI/SNF complex subunit SMARCC2 OS=Mus musculus OX=10090 GN=Smarcc2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04433	SWIRM	SWIRM domain	Domain	Interproscan
PF00249	Myb_DNA-binding	Myb-like DNA-binding domain	Domain	Interproscan
PF16495	SWIRM-assoc_1	SWIRM-associated region 1	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007526	Domain	SWIRM domain	Interproscan
IPR001005	Domain	SANT/Myb domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR017884	Domain	SANT domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR032451	Domain	SMARCC, C-terminal	Interproscan
IPR017930	Domain	Myb domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12802	SWI/SNF COMPLEX-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11649	SMARCC; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C	-	Chromosome and associated proteins	ko03036	deepkoala