Gene detail

Detailed information of eanc_s007.g0229.t1 in Fimbriaphyllia ancora

Genomic Location: s007:3961134...3965555
NR annotation: CAH3179099.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s007.g0229.t1

ATCTGCACGATTTCACGATTTTGAGAAAAGCGAAATTTATTCACACGAGCTCTTTGTGAAGCGAAATTTTCCACGATTATTATAACAAGATGTCGCACTTCAGCTTTGAAACTGAAGTTAACGATCTCCTGAGACTCGACGGACCGATGAACAAAGGTCCAGCTCCAAGATGGCAGAGAAAATCGACTGAGCATCGATGTTCCAGCGCAGCGTCCTCCACTCCGCTTCGCAATTCTTCGAGGCTTAACTCCAGCAAAACTCCTTCCAAGACGCCGAAATCACTGAAGAAAACACCAGGGAAAGCTAAGACGCCGTCCGAGGACAGATTTATTCCTAATCGAAGTGCCATGAACTTTGAAGCGAACTATTACAAGATGGTTTCAGCTGATCGTGAGAACGAAGAAAATGAGTGCACGAGCCCTTCGAAAGCAGAGTTCAGGAAAAACTTGGCAGAGAATCTTGGCGGAGACCAATCGAACGCTAGAATTCTTGCATTCAAGAGCAAACCACCAACGCCTAGGGAAGGCCACCTAAACGACTTACGAGTGTTGTACAGTCAGAATAAAACTCCTGCTACATCTACAAAGAAAAACGCCAGGCACATTCCTCAAGTTCCCGAGAGGATTCTAGATGCACCTGATCTCATTGACGATTACTATCTTAACCTACTGGACTGGAGTTGTAACAATCACCTTGCAGTAGCACTGGGTGGTTTTGTGTACCTGTGGAATGCTACAACAGGTGATATTGTACAGCTGTGTCAGACTGCAACACCTGATGCTTATGTTGGTTCTGTGGCTTGGATAAAGGAAGGCAATTACATTGCATTGGGAGACAGTGATGGTGTTGTTCAGTTGTGGGATGTAGAGGCTCAGAAACGTTTACGCAGTATGGCAGGCCACGCTGCTCGTGTTGGTTGCCTTTCATGGAACTCCTACATTCTTTCGAGTGGAAGCAGAAGTGGAGCAATTCACCACCATGATGTTCGTGTGGCAGATCACCATGTAGCTACTCTTGCCCGGCACTCACAAGAAGTGTGTGGATTGAAGTGGTCCCCTGATGGAAAATACCTCGCTAGTGGTGGAAATGACAACCTTCTTTTAATCTGGGATGCCAGCGTCAATACCATTAGTAACAGTAATTCTCCTCTCTACACGTTCAATCAACACCAAGCTGCTGTCAAGGCACTAGACTGGTGTCCATTTCAACGTAATGTACTGGCAAGTGGTGGTGGAACAGCTGATCGCCATATCAGGTTCTGGAATGTTGGTGCAGGAAATTGTCTCAACAGCATTGACACTCATTCACAAGTTTGCTCCATTCTTTGGTCAAAAGAATACAAAGAACTAGTGTCCAGCCATGGTTACGCACAAAACCAACTGACTGTCTGGAAATACCCATCAATGGTGAAAGTGACCGAACTGACTGGACACTCCTGCCGAGTGCTCCACATGGCTATGAGTCCAGATGGACAGACAGTAGTCTCAGCAGCCGCAGATGAGACGCTGAGACTTTGGAGATGTTTTGCTTCTGATCCAGTCAAGAAGAAGTCGAAGCCAAACACAACTAGCAGTTCATTGGTTCATCGTGGTATTCGGTAGTTTACTGAATTTTACAATTCATAGTAGAAAAATTTTATTTAAATATTATTATGGGCAATTGAATAGTTCAGTAAACTGAGGATTTAAAATTCATGGGTAGTTTGTATATAAAGGGAATGTGACTTTCTTTGAGACAACTACTACCTGCAGAAAAAAAAAGACCCATTGACTTTTCTAGATGTTACAAGGGAGCTGATCTGCTGGCCAAACACTCTTTTGCCAAAAATATCAAACAAAATTTTAATTCACAGTTCCATTACAGTTTATAATAACCTCATTCTAACATATGTAAATATAAATTAAGGTTGACTTAATGAATCAACTTGTATTATTAAAATTCAAAGTTAAAGTTATGCTGTAAATATACAGTGTAGAGAATGTTGATGAAAAACAAACATTTATTAGATTACTTAATAGCAAGGCTGCAGGCAAGAATGGTCATGGCAACTTTTGACCATTTTATTTGAAAATTTAATGTTTGTGTACAAACAAAATTCTTTGGAGTATATACTGTAATTTTAGTAAAAACACAAAATTTTAAGCTTGAAAAATTGCTTGCATGAGGCCTTTCAAGGTTTTGGGTTTGTAAACTTGATAAAAGTTATAGCATTTTTGTAAGATTATTTCTTTCTATAATATTAGACATGTTCTGTAAGTCATTGCGTGGTAAAAGAAAAGTGTAAATACTTGTTTCAATTAAACCGTGCAGTTATTGTAAGTCTGGTCTCAGATGTGATAGCCTTTGTATAACTGTCCCCTCCCCGATTTTTTCTTTGACTTCGGCAGGTGTGCGTTTCAAAAAGTACTGAATTGAAAACCCTACTCCTCTTGCAACTCGTGCATGAGAGTAGAGAGCTTGTTTGCAGGCTTCAAATACAGCCATGACACAAACTCAAACTTCCAGGGAAAATTCTGTGGCCTACAATGGAAGCTTAATCTTCCACAGAAtgaaaaaaattaccagct

Transcript

eanc_s007.g0229.t1

Protein

Uniprot

Gene family

Uniprot term	Description
Q62623	Cell division cycle protein 20 homolog OS=Rattus norvegicus OX=10116 GN=Cdc20 PE=1 SV=2
Q9JJ66	Cell division cycle protein 20 homolog OS=Mus musculus OX=10090 GN=Cdc20 PE=1 SV=2
Q12834	Cell division cycle protein 20 homolog OS=Homo sapiens OX=9606 GN=CDC20 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12894	ANAPC4_WD40	Anaphase-promoting complex subunit 4 WD40 domain	Repeat	Interproscan
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR024977	Domain	Anaphase-promoting complex subunit 4-like, WD40 domain	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR033010	Family	WD repeat Cdc20/Fizzy	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19918	CELL DIVISION CYCLE 20 CDC20 FIZZY -RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005680	Cellular Component	anaphase-promoting complex	Interproscan
GO:0010997	Molecular Function	anaphase-promoting complex binding	Interproscan
GO:0031145	Biological Process	anaphase-promoting complex-dependent catabolic process	Interproscan
GO:0097027	Molecular Function	ubiquitin-protein transferase activator activity	Interproscan
GO:1904668	Biological Process	positive regulation of ubiquitin protein ligase activity	Interproscan
GO:1905786	Biological Process	positive regulation of anaphase-promoting complex-dependent catabolic process	Interproscan
GO:1990757	Molecular Function	ubiquitin ligase activator activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03363	CDC20; cell division cycle 20, cofactor of APC complex	-	Chromosome and associated proteins	ko03036	deepkoala