Gene detail

Detailed information of eanc_s008.g0063.t1 in Fimbriaphyllia ancora

Genomic Location: s008:881928...888233
NR annotation: XP_020629366.1, tripartite motif-containing protein 3-like isoform X2 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s008.g0063.t1

GAAGAGTGAGAGCAAAATCTGCAAAGAGAAACGATCTGGTTGTTCTTGGAGACTGAGAGGTTATTTGGTCAGTGACGAGGTGATACAATTCTCTGGCAATACCCAATAGTGTTTGCGCCATAAACGATCAACTGACAATATATAAGAGGAACAGTTGATGGCCTGTGCATCGCCAGCAAAAACATCCACTAAAGAGACGACAAACTTTGCCCGGTTGTGTCGCCTTTTGGTGGATCTTGGGACTGAAGTCCTCAGGGAGAAATTTAATGGCATCCACTCACCAGCAAATTTACATGCTGTCTTGGCCAGAGAAACACCAACCTTGCAGCGACTGAAAAGACGGAAGATAATCAATCCAATACAAGCTCTTTCCTctgctcccgcaactggctgggacgctcttcctgctgcaacagacacgactcctgaagccgacattgctcgtgtgaaatACCTTAGAAACACCGTGTTTGCGCATACCGAGCACGCTTCTATTGACAATGCTACGTTCAGCAGCCACTGGAAAGACATCCGGGAGATCTTTGTGCGGCTTGGAGGAGTCAAGTACGGAGCAGCTGTTGACCTTCTTGAAACGGAATGCATGGACCCCGAGGCTGAAGAGCATTACATTGAGCTTCTCAATCAGTGGAAGAAGGACGAGGACAACGTGAAAGATAAGTTGGAAGGAATCGGTAGTGGAATAGAAAAGGTCATGAAAAAACTTGAAGAAATTACAACTGAAGGGGTTAGCTTGAAACCAAAAGTAGAAACCCGGGGAGCCATTACATGTTTAGATATTCTCCAAGCTGAGTGTGAAAGTGTCTTAAGTCGGTGCGAGGATCTTTTGAATGCAGAGGAAATTGAAACTTACAGACCTAAACATGTTTGCTATGATGTCAGTAAAGAAACTTTGAGATTTGCATTGGGTGACATGGTCGTCTTTCATGTGAAGCCTTCACAATCCCTGTGTGAAGCTGAAGACGATTTTAATAAAGCAGAATTAGCGGGAACAGAATCTGACTTGACTGCTACTATTCGACAGGCAGGGAGAAACCCGTGTGATGTTAAAGAAGGGAAAACGACCAGTAAAACGAAACGTATTGTAAAGGAGATGAGAAGAGATTGTGAGTTTGTCAACAACATAAAGAGTCACGAGTCACAAAGGGTCGGTGTAAATGATGTTGTCGTTGAAGCCAATAACAAACCACTGACCGCTGTTCCTGGAGTTGAAGAAGTGGCTGCACACACGTACAAAAAGATTCGTTCCTTTGGAGGAGAGAAGTTAGTCTCACCGGTCAGCATTGCAGTGAGTGCGAAAGATGGTAATATTGCCATAGCAGATAGAACGAATCAGTGCATCTATCTCTATAACCCTAAGTGGAAATACCTGAGAACAATAGTGGACAAGGGCACTGGTGATGAGATAATAGATCGGCCCCTGTCAGTCGCATTTACAGTATCTGGTGACATCATTGTTATTCATGGGAATATCGATGCCAAAATGTCCGTTTTTACTGAACGTGGAAACTTTATTACCCATATTACTAAGCATTTGATTAGACCAAGTACTGTGTCTGTTGGAAAAGAAGGTAACTTGGTTGTGTGTGACAGTTATGAAAGGACAGTGAAGGTCCTTTCCCCTGACGGTAAACACCTGATTCAGACGCTTCGGGATCCACACAGCGATGATTTCCCAGTGTTCGCTTTTGATCACGAGGACAAGTTTTTTGCTTGCTATAGGCACGACAGCTGTATCAGGGTCTTCAGTGAAGATGGACAGCTGCTTCAAAAGatcggttgcaagggaactggtgacggacagctaagagatcctagaggcatcgctattgacagGGTGAGAGGGGAGCTAAAAGTTGCAGTTAATAAATGGTCGGGGCCTAATTTTTCAAAGCGCGTTTAAGCCAATCGTGTGGTAGTGTGCTATTTTTAATACTAGTTTGATTGTGGCATTCTTCAAATTGTTCCAGATGTTGGAAAGTGTGAGAAGCCCTGAACTTAGTCAAATGGAAAAATGGAAAAACCTTTTCCTTAGTCACATTGTAGAGAGGGTCATCGACCAGTACATCACTAAAACCTAGATCTAGAC

Transcript

eanc_s008.g0063.t1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18738	HEPN_DZIP3	DZIP3/ hRUL138-like HEPN	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041249	Domain	DZIP3-like HEPN domain	Interproscan
IPR011042	Homologous_superfamily	Six-bladed beta-propeller, TolB-like	Interproscan
IPR050952	Family	Tripartite Motif and NHL Repeat Containing E3 Ligases	Interproscan
IPR001258	Repeat	NHL repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24104	E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan