Gene detail

Detailed information of eanc_s022.g0347.t1 in Fimbriaphyllia ancora

Genomic Location: s022:5264076...5269552
NR annotation: XP_020623987.1, uncharacterized protein LOC110061494, partial [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s022.g0347.t1

CTTGGTAATAAGGATTAACTAAACGTCGTTTTCAGGTGCTTGACAAACTACCAGTTTTTGCAGAAAAGGATCGAAAGTGGAAGAATGGAGATCTACCGTTTGCTTGAAGATCTGAAACTTGCAGCTAACTGTTCGACTTTGGAGGATGAACAGAAACAGAATGTCCTGGGAGAGATCTCCGTCGCTCTTGAGAGCAATGTTTATATTCTTCTTGAATGCCCCCACCTTGTGCACGTGTGTTTGTTAAACACGTCAAACAGTGCCAAGGAAACCGTTTTGATTCCTCAGGAGTCGGGCCCTCGGTTGGATTGGGCTGTTGTTGATCTCCTTTACACTGCAGATCTGTCTGGCTTTACGTTTTTTGGCACTTCTTCTGATAAGAAGATAGTGGCTGGGGCAAAGGGTCGTTCTGTAGTTTTTGTAGATCTATCTACGTTGCAGGTATTGTATGGCCCTTTCGAGGTAAGTCAAGATACGATTAAGTGCATTAATCATTTGGAGTTTTCGTCAGACGACAAGTCTGTTTTTTTCGGACGTCTCGACAAATGGCTATCGGTCAGTGGAGGAGGTCTCGTGGACCTTCCTCAGTTTAGAGGAAATTCTACGATTTATGACTGGGGTGTACTTACTCCCGACAAACAATGGATTGTCGTGAAAAGGGCCTCTCAGGAACCTCACTTTGACCTCTCAGCGACCTGTAAAGATAAGTGCTGTTTGAGTGACTTGCTTGTTCTATGGGCTGTGAAGGAGATTGATTACAGCTCAGATGATAAGACCATTTACTGTCCTAATCTTCGACGGCTGATATTTATAATAAATACAACTTCGGAAGAACTAACCGAACGTTTCCTTCATTCCCTTCAATTGAACACAAAATATTTTCATGTGCGTACCGTGCCTTACGACGACCGTTGTTGTTGTTGCAATAAAATAAGAGAACTAACAGAGAAAACACAAGAGGCATCCCTGGCGGCTGTGCGCCAACTTGTCGTTGAATTGTATCCTCACATATTCCAGTGTCAGATTTGGAATTTACAGACTGGGAGATCACCGCTGCAGGATGTTCTTTCGCTGAATGATCAGTTGGATCCATTTGTCTATTTTTACCACATGTCCTTTGTCTTTCATATGTGGGGGGAAAAAACGGGGTTTTCAGGAGTGGATAAGGCCTTATCAGTTTGTAACATTGCTGTAGCGAACGCTGCACTTGCTCTATCATCTAACTCTACAGAATTCATCGACAAGAGAGACATGGAACATTGGCAATTACAGGAAGTAGCGGCGAGTGTGGGGCTGGAGCTGGAATTGTTCGCTGAGTTGGAAGATTGGAAGGCAAAAAAATTGCGGAAGAAGGAGCTCATGCGTAGACAGACTCGTCGAGGCTATTTAAAGGGCTATCACGATCTCTTTCCCATTTTGTTTTGTGCTTCAGGCAGTAAGAAATGGGTCGTTTATCAGCTGGGGTTCAGTCATGTGAGCATTCAATCGTTTGAGAAATTAGGAATTCACGAGCAGCAACTCAAACATGTAGTGACCGGGGTACGCCACTTCTCCTTTACAATTGATGGACATCATTTCGTTTATTCAACTGAAGAAGGCTCACTGCATGCCTTCTGTCTCCAAACAGGTAACGTTTTCACCAGTGTTTCGGGAAGTAACCTTTTTTACTTTACAAGAGAAAGACAGGTTGGGTATTTGTTTCAAAGGGGTACTGAAGAAAGAGCCGTCTTCTTGTCAAATTTAATCAGTCCTTTAAAATTTCTTTCATTGTCGTCGGTGCTGAAGATCTCGGTAGTGAGGAAATTCACGACATCCATCTTAAGTTCAAGTGATACCATCAAATCTGTTAGTTCCGACTCGTCGGTTTTCCTGTGGCGTATTACGGATCAAGGTGTATATTTTATGTCACAGTCTTCAATTGCAGGTTTCCACCACCACACCTGTGTGCCGTCTCCCAATGGAAACTTAATTGCTTTTCACAGAGGGAACGAGGTAGGGCTGCACAATTTCCGTGAACAGGAGCCTCGTATAGTATTCAAACGAGACCATTCGTTCACAGTTGTGTTCGCGTTTTCAGCCGACAGCAACATACTTCACATTTGTATCCAGGAAAGCATGGAGAGGCCCTGTTTCTATTTGTGGGATCTTGAAAAGAAAGTGTTGTCACGCATATTTAGGTCACCAGGACTTCAGAATGTCGAATGCTTTTGCATTTCTCCAGATGGGAGGAAGTTAATCTTGTGTCGCGAATGTGAGATTGAGTTCTGGGAGTACGATAAACGGCTTACTTATCGCTTTGTAATGAGAACCGGAGTAAAGAGGCCTTACAAGTCTGTTGAGTTCAGTCACTGCGCTATCTCGTCAGATGGTGAGCTGCTGGTTTGTTGCTTTGCAGACATCGTTTATCTCTTCAGGCTTTGCGTTCCTGACATTCTTTCCTCCAAGCAACTTCTTCTCGGTCATCTCGGTAGGATTGAATTTTGCAAGTTTTTGAAAGCAAGTCGTTATCTTATTACTTACGGTGTCGATGGCGTGGTTATCCTGTGGGATCTCAGCGAGGTGAAAACTGCGAAAGCTGCCACTTTCGCAAGAATAACGCAAAGTCAGGAAAACATAATCAGCATGGCTGTGTCTCCTAAGGAAGACAGAGCTGTTTGTTTTACATCTTGTGGCCGTGTATGCCTTATAGAACTCCGCAGACTTGAGAATGCTTTGCCCTCGAAATTACTGACAGCACCGGGGAATGGCCAGGTAGATAGAAGTGAAGAAAACGGTTTACAGCTGGAAGAGGCATTCTCCTCAACATCTAACCCTCTGACGTCATCTACAGACGACGAAGAACTGAGCAGTTCTGACTCAGAAGGAGATATGAATTACTACTTGGAGCATGAAGACGTTGACGAGCTTGATTGACCGAAGGCCACCAAAGTCCAGTGTTATCAGTTAGACCTTAGAAAAAGAAGTTTGAAGCTGTTATGAACAGGAGGGACATCTGCATAGTTACTGGATATAGTAACTCAAAAGTATCATTTTTGTGTCGTAGTTCACTTAAAAGCATTGAATTTTTCTTTCCTTAGTGCTGTGGTATTTCTTTATCTGATTCTTAGTATTTTTACCGCTGGATAAAGAAACTCAAAAGTGCAGTTTTTATCCGTAAGGTCAGTAATTAGCGAATATTTTTTCGTTTGGAATCTAAATTGTATTTTGGTTCTCCAATCTTTACCGTAGCTCTAAGCGTAGACGCAAAGGGTCATTAGTGGTCATTTCTTATTAAGCACAGTTACAGTTTTCATAAAAGTACATTGTAACCATTGCTACGAATGATACGTGCTTTTGATGTACTTACGTAAGCTTAAAAAAGTCAGCAAAATCATGAATAGGATGCAAAGTGCAAAGAAATTTAATTCAGAATAGGCTATACAGAACTTCTTGTATGGTATTCAGTATATTCATTGAGACTTTGTTCAGGGATCATAGTTTTCACTAACAAAACAGCTGAAATTGTTGAAAAAATCGAATCTTTATGATAGTTTTGATATTTTAGGTGTAGTTAAAAGAAAGCATACTGGGTCTT

Transcript

eanc_s022.g0347.t1

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19879	TRANSCRIPTION INITIATION FACTOR TFIID	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005669	Cellular Component	transcription factor TFIID complex	Interproscan
GO:0006367	Biological Process	transcription initiation at RNA polymerase II promoter	Interproscan
GO:0016251	Molecular Function	RNA polymerase II general transcription initiation factor activity	Interproscan