Gene detail

Detailed information of eanc_s025.g0071.t1 in Fimbriaphyllia ancora

Genomic Location: s025:1157976...1174479
NR annotation: CAH3130349.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s025.g0071.t1

CTGAGTTAAAGCAGATATTTAAAAATGACCTAAAAAGGAAAAATCACGGAGTTATTCCTAGAAAAAAATAGATCCCCAATGCTACCGTATAGTAACAAAATATTACGTGAACAATTGTTCAAATTCATTTCCCGTTACCTTTCTAAGTAACTTCATAATGCTGAAGAGAACTTCGTAGCTTATAACGGGGTTTCATAGTAAGGGCAATTTTAGTTCGATTCTTCGGCTACCAAGTGTTGTGAAAGTTAATTCAAACTGGAGCTGAGCTGACGTCAGATTAACCGAAAAGCGAAGAGGTTGTATAATTAGTCTAATCCAAGAAGAGACCACTAAAACTTGCGGGAACGCTATCCAGCCTCTAATACCGGCTAAAAGCCATGAAAGAAGACGTGCCAAATTGACGCGTATTGCGCGCGCTAAGAGCCCGAGCGGCACGCGGTTTCACCACTCAGCGTACTTATGCACACGAGAGTTATATCAACTCAGTAGTTTTGACATCCTTTTCTGCAACTGCTTCACTTCAAGAGTCTGTCAGCCATACGATCAGCGCTTCACTGTTAGATACATTTAAAACTGTTATGTTTACCTTCTAAACAAGCCCAAAATAAATCATACAGGATACACTTAAAATCGGGAAACCACAAACTTGATGAACACGTAGTACATCGTGATTACGTTTACGAACAAACAACTTCCGACCCAAAACAAAACTTATAAGCTTTGGCTTGCTTACTGATCCTATATCGCTCTCAGCTGGAAAACTTTACAAGTTCCAGCTGAGTCAGTTATCTCTTCCATAATTACAGATAACCTTTTAAAACAAGCTCATTAAATTCTTGAACTCTTTCACTTTACAAGGTGATATGTTTCTCCATATTTACTTCGTACCGCATTAAAGAATTACAGTTATCTGCTGGTCGCATCTCTGTGAAGTCGTGGTATTTCCTTCGTTCTGTCGTCTGTATGTCCGCGAGCCCAGCAAATAAGCACGAAGTAGCTGAAAAGCCTCATGGCGCATGCGTGCGGCATTTTGTTTCACGCAAGAGCAACGTAGAAATCGTGTATCTTTATGCAAATTATCTTCGAATATCTAGAGGCACAAAAAAGCAGTTTGCAGAGCTTTCATTTGAAAAGACGCATTTATGAAATTTTTCTCAGTACCAGTTCAAAACTGTGGTTTCGAGTAACACAATGAACAGCACGACAGTGTTAAATGGAAAGTTGGACCGCACGCGTGGGCAATAAATCAACCGCGTTAATTGTTATTATTACAAGAGCTAGGAACTTAATTGGATTAAAAAGCACGATTGTATCATAGATAAACACACAGAAAACTGCTTTGAGAACGCAACAGAGAAATCAGTACGCAAAGCTCGCGGAAACCAATGGAGAAACGTCGCGTCAAGGAACTCTCAAAGTCTAAAGTTTTTCCAAACTCTTTACGTACGTTTCAAAGTGCACGCAAAACTCTGTTTACTCACGGGCCTGTGATGGAAACACATTTCCTCTCCTCAGACATTGAAAATCGCATCCTTGCGACAAGAACGCTGGGCACCGAACAAAATATGTTTGACATGAGTAAACGCGAACGGTGGCGACAGCAGAATGTCAACATGGCGTTTTCAGATCTTAGAAGACTCTTGCCCACACACCCTCCGGACAAGAAGCTGTCCAAAGTAGATGTTTTGAGGGCTAGCATCAAGTATATCAAGTTTTTGGACAGCGTTTTGAAGAAGATGGATGGATTACAGGGAGAGAGAGGTGACAAACACGACATCGAAGTCATTGACACTAATAAAAGCAAGAAGAAGGGTGTCATTGAGAATTTCAGTATTGGCGAGGAATCCGTCGATTCCTGTAAATTCTAATAGTTCTGGCTTCTAGGAACAGAAGCAGGCGAAATCGAGTACAGGTAAATACCCTTATAACGGAGGGGTCGAGATTTTATCACCAGGCCTGCACGATAGGGGCTTGTAAGGAAAAGAGAAGAGGACAATGGGACCACGCGCCGGTTGAGGGTAGCCCTTCGTTCTCCACGCTCTTTCCACGCGCGCAGCAGTCGCGTTTTCACTCTTGGTTCTGATGCAGGTACTCTGGCTACCTCCACCCCACCAACGAATCACGTTGTGTGTGGTACACGAGAGTCTTTCCAAAGCTCGTTATAGAAAACAAAAAGATAAAACCGCAGTCAGAGTGGCTCGGGGAAATGAAAACCAGATACTGAAATATGCATTTAGCAAACTTGATCCATTTAATACCGGGGAGACAAAATTAGATTTGTAACAAGGCGATCCGTGACCGCAAGCGGATCACGTTTGAAAAGCGGGAATGTAAAACACTTCAACAAAGGATTAATTTTTTTAACAGGTTTCCGACATCAAAAATGCAAATTGGTCATTTTCTCCGCTGGATCGGGTGGCTTTGCTTCGTGTAATTGAAAGCAAAGACCATCCCGATACGTTAACGTGACGTAGTAGTTTGAATTTAAAACACAACGCTGACCTCTCAGTCAGTAAGTGACTGAAACTCGCAAAAGGTTAGAAGAGACTGGGCGTGATATTCTGCCATTAAAGAGTAACAATAGAAAACTATTTGTAAGTTTTTTATGTATTGTTTCTTCTTAATCCTTTGATAATACAGGGATTTCAATAGTTTTTTCCCATAATTACTTCCTAAGAGGATTTAACTTTTGCGGTAAGAGTAAAATTAACCATCGGCTTTACACCCCGTTTTATGTTCTTTTCTGGGAGTATTTTTAGAATATTTGAATGTAATCTTAGACGCAACAATTTTTTCATGAATAGGGCCAAAATGAAAACCACTAAGTCACGCCGTTCATATACTTTAAAATTGTTACTATTAATCTTGAATTCTGATACTGAAAAATATATTTTAAGGATTGCGCTTACATGAGGTAACACGTAATGATATTTTGTTATGGTCTTAAACGTCGAAAATCCGTGAGGCGGTCGTATTGTTTTAGGATTTCTCTGCCTTGATATTGGAGGTTCAGAGTATAATTGTGTCACTAGAATTACTTCTCCTTTTGGCAGGATCTTCTTTAACAAAATCTGGTGTTCACATTGCATTAATAACATAAAGATAAATTTTAAAGAAGTATATTTATGTTTGCGCGAGTATTAAACACTATAATTTTCGCCTGACTTTTTCAAATGCCAGAAAGTTAAAGCGCTATTAAAATTACCACGTTTTTTTTTCTTTTAGAATACATAACTCAAATAACTTAAGAAAATCCTACAATATTTCCGGATTTACTATACTAATCAAACACACCGCTTGCAAGGAAAATGTAGCTGAGTAGAAAACCACTCGTGAAAGATTATATCTAAAATCCGATAAGTAAAAAACTCAATTTATAAACAGCGCTGAACTTTGTCAACATGGCTCATCCCAAACTAACTTATTGCATCACACGACAAATTCCGTCGTGCCCCGTAATCACGCGCGCCAGCGGTAAATTCGTGGAGTTTAAAGAGGCAGAATACAGCACTGCTCCGCTCTTCAAATCCATCCAACTCAAATCATTCAGCGCCTTCAGATGTCCATAACAAAATAAAGTTAACGTGATTTTTGAGTCGGATCAGCGCAACACCGTGTTGTAACGAACTCTGTGTATTTCCTGTGTCGCTTATGTTGACCAGATTCGCAAGACTTCGCGATTGCCTTATCAAGTACTCAAAAACCCAGGTAAACGTTTCCGTTCATCTTGGTCTGGTATCGGTTTTGCCTTCAGCTTCGTCTTCAGTATTTATTATTTCATAGCTGCTTATCCTTTTTTTATTCTCATAAATTCTATGTTTGATC

Transcript

eanc_s025.g0071.t1

Protein

Uniprot

Gene family

Uniprot term	Description
Q90YI8	T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubripes OX=31033 GN=tal1 PE=2 SV=1
O93507	T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio rerio OX=7955 GN=tal1 PE=1 SV=1
P24899	T-cell acute lymphocytic leukemia protein 1 homolog OS=Gallus gallus OX=9031 GN=TAL1 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	bHLH

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00010	HLH	Helix-loop-helix DNA-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011598	Domain	Myc-type, basic helix-loop-helix (bHLH) domain	Interproscan
IPR040238	Family	Helix-loop-helix protein TAL-like	Interproscan
IPR036638	Homologous_superfamily	Helix-loop-helix DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13864	T-CELL ACUTE LYMPHOCYTIC LEUKEMIA/STEM CELL LEUKEMIA-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046983	Molecular Function	protein dimerization activity	Interproscan
GO:0000978	Molecular Function	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Interproscan
GO:0000981	Molecular Function	DNA-binding transcription factor activity, RNA polymerase II-specific	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K09068	TAL; T-cell acute lymphocytic leukemia protein	-	Transcription factors	ko03000	deepkoala