Gene detail

Detailed information of eanc_s033.g0113.t1 in Fimbriaphyllia ancora

Genomic Location: s033:1545974...1553327
NR annotation: XP_020616096.1, ras-related protein Rab-13-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s033.g0113.t1

TTCCCACAATCCCTTTCAATTCACCAGGTGTCACTTGTTGTGGAGCTCAGCGGAGCTCATGAATTTGTTTGCCAATTATCTAGGGAAAACCACCACCGCAGTAGGAATGCCGTCGAAACAAGCAGCAGTGGCAAAGGTTGTGATTGTTGGAGACAGTGGAGTTGGAAAATCCACTATCTTTTCGTCGTATTTTGGAGAGCGGTTCAATCCCTGTTACGTGCAAACTCGAGAGAGGGAAATTAAGAGCGATATCGTGAAAGTTGGCCAACAATCTCTAGAGCTTCAGATATGGGACACTCCCGGTAACCCCCTTTGTAGGACAATCACAGCAGCATATATACAAGACATCCAGGGAGTGATAGTTGTATATGATGTGACTGCTGATGACACTTACTACAATGTGCAACATTGGCTCACAGCTGTGAATCAGTATGCAGGAAATGGTAATGCCAAATTTGTATTTGTTGGAAATAAGACTGATCAAAGGGAAAGAAAAATATTTGTGGAATCTGGTGAGCAGTTAGCAAAGCAGTATAATGGAGTATATGTTGATGCAAGCGCAAAGACAAAGGAAAATATAGATAAGATATTTCAAATAATGGCAGAAGGTATATTAGGTGAAGTAGCAAAGCAGAGTCCACCTTCACTTTCTGAATCACAGGAGAGAAGTGATTCCCCGGACAGAGACAACGGCGGGGGAGGATTTCGATGCACTCTTTTATGATATAAATCCGTCTAAAATTGATCCGTTTCTCAGTAACTTTCGAGAAAATATATCCCAATGTAATTGTAAATGAAACGGTTTCTTAACATTTGAAAAACGGCGCGGAAGGTGAAGACTGTTTATACGGGCTTTGCACTGCTTGACATGACAACACCAGCTTCTGTGCAGTTTTTGTTAAATGCCTGAGAGCGTAATCAAACGATTTAATAAACATTTACGGGCGCAGAACTCGTTTGAAAATAGTTCTACGAAAGTTACTGGAGCGTGCGTAACAAGAGTGAGCGTGGCTTTTTTAAGGCCAAAAGATGATCTTGCATTTCTGCCAATAAATTTTATGGCgtttatacaatggacgctgtaaaaccttgcggtttgattggtctagaggagtttgcgatactatagacgcacgaatgacatcataagtcaaagaaagcaaaaacaatgtataaaacaaatacattccatttggcagtgttttgtgtactctgataacgcaccaaaaacgtcgaaacgtgattagaacatcagtcacgcggctcgcagtatactttcattgttcttaccacattttgacgtcattcgttcgttatcagagtacgcacgcactggtaactgggatctatttgttaagcaGTGCGCAGATACACTGCCAGCGGACTGGCGTTGATATTTTTATGTTCTGGACGTGTGATGTGCCAAATGACGTAATAAAACATGCCAGCCAACTTTGATAAAAGGCAAATAGTTTAACGACAATTCAATCAGTATTTACTGATTAAAACATTTCACTTTAGGTCTGTCAACTACAAATTTTACCTTTCATTAGTTTTGTTTTCTTATAAAAATGGTGGGGGTTGGGGGAAGGGGGGGGGGACTGAGCAAAGAACAGGCAATTTTGTATTGAAAtaaaaccgttttcaattgagtgtcgaaagtaaattgcttttgcattgattttgcatggctttggtttgtgattggccactttttccaccaatgaaatccaaaaccaatcgagacctgcacgcgcgcattttcccgcgctttacgccggtttcatgtaattgcttcaaattctgattggctcgttgttcgcgtctgttgtgattggtcggagttggttttacggcactcatttgaaaaccgctttaATGTCATTTCAAAAGCCAATTGCTAGCGCTGCTTTGAGAAATATATTTTCAATTAAAAGAATGTTAGTAGTGCAAGAGAACTCTTTAGGAATTATGGATAATAAAATTTCAGAATGAAGTGAAAATGTAGCCGATAATGGATTAATAGTTTCACCTGTGTCTGGTAAACTGGAGAATCG

Transcript

eanc_s033.g0113.t1

Protein

Uniprot

Uniprot term	Description
P07560	Ras-related protein SEC4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SEC4 PE=1 SV=1
O42819	Ras-related protein SEC4 OS=Candida glabrata (strain ATCC 2001 / BCRC 20586 / JCM 3761 / NBRC 0622 / NRRL Y-65 / CBS 138) OX=284593 GN=SEC4 PE=3 SV=1
P0CY31	Ras-related protein SEC4 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=SEC4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071	Ras	Ras family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050227	Family	Ras-related protein Rab	Interproscan
IPR005225	Domain	Small GTP-binding protein domain	Interproscan
IPR001806	Family	Small GTPase	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47977	RAS-RELATED PROTEIN RAB	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016192	Biological Process	vesicle-mediated transport	Interproscan
GO:0005525	Molecular Function	GTP binding	Interproscan
GO:0003924	Molecular Function	GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07891	RAB22; Ras-related protein Rab-22	-	GTP-binding proteins	ko04031	deepkoala