Gene detail

Detailed information of eanc_s095.g0017.t1 in Fimbriaphyllia ancora

Genomic Location: s095:294366...323966
NR annotation: CAH3143354.1, unnamed protein product [Porites evermanni]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s095.g0017.t1

GCCTTTTCGTTTCTTCCAGATTTCCAAACATTAACTGTTGCCTACAGGTTTTAAAAGTCCAGTAGCAGAAGATCGGTAATAATGGAGTCGAAACCAAAAAAGCACAGGAGGAAGAGGAAAAAGGTTGCCCCTTTCATTCAGAAATTATGGGACGCACTCGAGGATCGTCCACATCTGGTTTCGTGGAACTCGGATGGAAGAAGCTTCATGATACATGATGAGCCGGGTTTGTTAAAAGACGTCTTTGGGGATATTCTTCAGGGAAGCTTCCATAGAAATTTAAACCTGTATAATTTTGAGAAGGATGGTGATGTGGTTTATCACAAAGAGTCCTACTTCATCAGAGACCAGACTGATGATTGTGAGTTACTTCAAAAAATTGGGATGCGAAGGcagcagcagaagctgcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcCAGGTTTGAGCACCGGACTTGACAGTTTGGTATTAGCTGCAGAATGGCAGGTCCAAAACACACTCACACAGGCATCACAGCTGGCACAGCATGGTCAGCAGCAAGAGCAGCAGCCACGCTCGCAGCTTCCTAACCCACTCCCTGTTTGCAATAATCCACATCCATTTCAGCCGGAACCCCAAAAAGCAAATACAGGGAATCATGGAACTCTTCAGGAGCTTAAAATCTATCCTGCAGGTGGTCCTCTAAAGGGCGGGACCCCAGTCATGCTAAACAACCTCCATGGACTTGATTGTGAATATCTCATTGTGGTATTTGGAGCAAGAGAAAAGAAAGCAATAAGAGGACTTGAAGGAAATAGCTGGTTTTTAGAGACTCCCGAGTGGGAAAAAGCCGAAACTGTCCCCGTCATAATTATGACGCCAGGTAGAGTCGAAGTGGGACGCACAGACTTCACTTACGTAGAGGATGAGATTGACGCAACCATTATGTCCACCATATTCAACCAATCAAGAAAATCTTCATTTTGTGAGCTGATGGATCGGTGGTACAATGAAAGTCTCGCAAGTGGAGGTGTTACAGAAGTTAAACGGAGAAAACTGATGGAAGATGATGCCTCTGAAACGTTGTACTCTAGAGCTGATACTGGCTCACCTGATTTAGACAAAGAAGTACCTGGCTCTGACGAATTTGAAAAAATGAGTCGTGAAGATCAAACTGCAACTTCCTTTCACCACTGTTCTGAAAGAGACGACCAGCAACTGTGCAAAGGTGACACCTCGATACCGATAGACATCGGAAATGACGAAACGTCATCCCTTTGTTCCGAAAATGAGCGACGTGAACATGAAGATCCAGGAGTAACAAGCATTCACCATGTTTCTGAGAAAGACAAACAGCAGTTACGAGAAGTTGATATCTTGAGATCAGTGAACACTGGAGGAGACGAAACACCGTCCAATTATTCAGAAAAGGAAACAGACGATTCTGAAGATCGGCCTCAAACAGAGTCTGGTCAAGGAATATATCCAGCTGGAATGAGCATTGACCATTTGTCTGAGAAAGATGAAGAGCAGTTGCGTGAAGGTGAAATCTTGGGAACATTGAACACTGGAGGAGACGACACGCCATCCACAAATGCAGAAAAAGAAAAAGACGATTCTGAAGATCGGTCTCGAGCGAAGTTTGGTGAAGTGCCGTTTGAGATAAAAGCAAGAAGAAGAAGGGTGCAGCGTGCCTACGAAAATGCTTTGAGGACTGGAAAAGTAAAGGTGCACCGTGCTAGAATCATGCTGATTGGTCAAGACCGAGCAGGAAAGACGAGTCTGAAGAGGACCTTGCTAGGTCTTCCATTTAACCCCAATGAGCAGAGTACCGACGGAATAGAGGTTGATCCATCAGTGTTTGAGATTGATGTTGATCAAGTCAAAAATTGGCAGCGGATAGATGAGGTAGGCGTATCTCAATTTGCAAATGACCTTGCAAAGACGGTGGCGGAACAAATTGAGGAAGACGAAGCAAATTTAATGCCAGAAATACTGGATGAACCAAAGAAGCAATCGATGGTAGCCTTTCTACTGCCTAATTACTCTGATCGGACAGTTCCCACCAGAGAAGAGCTAACTAAACCTGAGAATGTACAAGAACCTCAAAGTAGTGGCGACTCTACTAGTCCCACTGAAAATGCAGCTAGAAATTCTGTGATACCTGAACTAAAAATCGACCCTGCTCTACCTCCAGAAGAATTCACACAGCATGTCATTCAGTATTTGGAGAATATGAACCTCTCACGTGATGCTACATCTACATCAGTTGAAAACCAAATGATTCTTGACttatgggactttgccggacaatgcttgtactacacctctcaccccgtgtttatgtcaccgagagcaatttacatgcttgtctacaatctcagcgaagagctaAAGAACACTGCAGAGCCCTGCGTCAGATTAGGACATTGTGATGTTCGTTTGAAAAATCCAAGTGGTGAAACAAATTTGGAGAACTTGTTGTCGTGGCTGGTGTCAGTTCACACTATGTCTTCTGCGAATTCAACAGTGGATGAGGCACGCCTGCCTTATTTGCGTCCTCCAGTGTTCATTGTGGGAACACATGCTGATAAGCCATGTAGAGCCATCCGTGAGATAGAATTAGAGATTCAGCAGGAACTTCTCGGAAAGGAACTCGATCTTCACGTAATCCGGCCATTTTTTTCGATAGATAACACCCAAGGGTCATCTAGTGATGGAATTCGTGCTCTCAAGAAAAGACTTATTGATGTTTTGAAGCAAGAACCGTACATGGGGCAGGAACTACCTATTCGGTGGTTTAACTTTGAGAAGGTTATCCAAGCTCTTGTTGCCAAGGAAATCTATTGCTGCAACCTCGAACAACTTAAAGACGCCATCCATAAAGTGTGCTTTATCGACAATGACGAAGAAGTTGTCACTATGTTGGATTTTTACCACGATCTCGGCATCATTGTAAAGCATGGCAGCACAGTGGTGTTACAGGCCACATGGTTGGCAGATGTCTTCAAACAACTGATAACCATTTGTCCTTACGAACACATGGACCCGAAGCATTCCAAGTTGTGGAAAGACATGGAAGCAACAGGTGTCCTGGACATGGAACTTGTTGATCACGTGTTTTCCAAATTTTGTCAACGAGGTTTAATCAGAGAGGACATCTTGCAAATGATGGAGCAGTTCGGATTGATCGTGAAGTTTGAATCTCCTCGGAATGGTTCACAGTATCTTGTGCCAGCTCAGCTAAAGACACCACCTGAACGTCTTCGCGAAGTCGAGCCCTCGTCTTCAGATCCGTGTGCACTATATGTTCACTTTGAGAGGGGTTTTGTTCCTCATGGCCTTTACTCACGGCTTGTGTCGCGATGTGCGAGATGGTGCTCGGAAAGTGGCTTCAAGAATCCTCCTAACTTATTCCAAGGGGCATCTAGGTTCTTTATTGAGGGGGAGTTTCTTTGTCACTTAATCCTATTCTGTAGGAAGCGGTTCATAAAGATCATCTTAAAACAAGCAAAACCTTCAAACATCGAAGCGCCATTAGCTGAGGATCAAGTGCGAGAAACAGCAAAGCTAGTACGGGTGTTTGTGGAAGACACATTGCAAAGTATGTCAAGGGATTTCCCCTGGTTGAATAACTTAAAATTTCAACTCTGTTTTGAATGTCCTTACTGCCCGAGAGAGGAAAATACGTGTCTTCACCATGGTGTGGTTCATTGCACCCAAGACGACTGCATATGCCTTCAAAAACTTCCTTCAGGCGGGCAGATGATCTACTGCCAAAAAAGCTTTTGCGACAAAATTCAGATCCCGCCAGGTCTCTCAAGATGGTTGCCAGTCAAAGTGAAAGAGGGTATCCCATCTGCAGATGAATTGGAGGACTTATCACTGAGGATTGGCGACACTTGGTGCAGGCTGGGACGTCGGCTGAATTTTGATTCAACGGAGCTCAAAGGGTTTGACCATGAGAATCAGATGTTATATGAGAAAGCATATGAAGTGTTGATGCGATGGAAGCAGAAGGAAGGCTCAGCAGCGACGTACCTTGTTTTATATAAAGCCCTGTGTCACCCATTTGTAAATAGACGAGATTTAGCAGAAGTTTGTTATACGACTCTTTTTGAGCCATAGACTCTTATCTGGGAAAAAGAATTGTGGTTTTCCGTCGATTTTAGGTTTTTGTTAGCTGACAAAAGAGCACAGCTGTTTCGTTGACAGCGGAAGTAAAAGCTAAAGGGTTGGTGATTATCCTAATGCAGGTCACCATCAACAAAGATAAACTTTACTTGTTAATACTGCCTATTAGGTAATTTCTACTATCAGTTCTAGACTTCAAAATTACTCTTGGCTATTAACTTCCATGATTACTTTCTTGGTCATTGCCTGATTGATTTCATGCACAGGGTTAACAAATAACTTGAAAATTAAATAAAAAACTATTGATAAACGACTAACCATCAGATGAACCAATAAAAATAGTATTCATATATACAGGCATGTTATTGTGCTGTGAAAAGAGTGACAACAGAAGTATGGGGACTTAATTTCCGCTGCCATTTAACAATGTCACTaggataatattgttttaatactcaacacactaataacaaagcacaatGAAACCGTTTTTATTGCAGAAAAGCTGGGCTGGAAACCAGTTTTTCTGCACAACATATAAAGTCCTGTATATCGC

Transcript

eanc_s095.g0017.t1

Protein

Uniprot

Gene family

Uniprot term	Description
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2
Q54WS5	Probable serine/threonine-protein kinase roco6 OS=Dictyostelium discoideum OX=44689 GN=roco6 PE=3 SV=1

Gene family	Subfamily
Transcription Factors Family	HSF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan
PF00447	HSF_DNA-bind	HSF-type DNA-binding	Domain	Interproscan
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF00531	Death	Death domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR036390	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR020859	Domain	Roc domain	Interproscan
IPR000232	Domain	Heat shock factor (HSF)-type, DNA-binding	Interproscan
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR000488	Domain	Death domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47508	SAM DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003700	Molecular Function	DNA-binding transcription factor activity	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan