Gene detail

Detailed information of eanc_s096.g0015.t1 in Fimbriaphyllia ancora

Genomic Location: s096:531874...561928
NR annotation: XP_020606915.1, fibroblast growth factor receptor-like 1 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s096.g0015.t1

GTTTCAGTCAACAATGGCTCTTTTTACAATTTGACGCATGACTCGATCGACTGGTGGAAAATTGCATAGACGCTAATCCGTGCGATCGACACTTTCCTTATCGATCGCCCTCTTTATGTAATTTACTTTCGCCACATCGTCCATTCAGCTTGTGATCTGACCTTCAGACGAGTATTTGCGATATCAAGAAGGCTGTGGCTTGTGAGGCTGTACGGAGTTTCCGCAGGATCTGTGAGACTGTGACGTTTAAGCCACTCAATATGTGGCCACGAATGCACGACAATGGCTTGGATGTCCATTTACAGTAACTGCGATTCTTCCATTTTTATTCTGGCTTCTTTTGTGTTTAGACATCACATTGTAGAAGTCAATGATTGAAATAGTTAAGGAAAGGAAAACAGATTGGGCAAAGGGCGCCTCTTGAGCTCGGAACTGTTTAGAAACAATAGGTTATCTTTTGTGCTGTAATCGGTAACTTGATAGACAGTAATTGTCCTAGTGATTGGCGTGTACATTGCCTTGAGCGAAATGTACTCTCGGTCGGCCGGCGAAATCCTTGGAGTTAAGACCTTTTCGCTCATTTCCAGAAGCTGAACAGAGGGAAGAACGTCTCGCTGCCGGCCGTAAGTTTACTAACAAGAGCCTCTGAATGCAGCTGTGGTTCAAAACCTTCTGAAAACCAAGTCGTTAAAAAATGCTGTTTATCAAGATAGTGTCCTTGGAATTCACTGTGTTTCTCTTTGCGGTCGTTCAATGTAAAGATCCTCCATCCATTATTGGAACAATAAAGCCACAGTACACGGTGATGGAAGGAGAAACCGTGAAGCTATGGTGTAAGGTATCCGGAACAGGTGGTCCTCCTGCGAGCACAACACTCACAGCTTGGCAAAAATTACCAAAAGTTTATATCACTAACACATTGGCAAGGTTTAAGATGAGGCTCGGAAAATATCTCAGAATCAAGAACGTGAAGCTCGAAGATCAGGGGACATACCTTTGTATCGCGAAAAACCCTTATGGGAAAATAGCGAAGGAAATAAGACTTGTGGTTCAAGCCCTGAACGAGACTTCAAGAATGCCAACACCTACAAGCACTGCCTATCTGCCGACAAGAAAAGGTAGTCTAAGGCCTCAAACAATTCCATTAATAGATGGTCGTCCACCAAAATTCAGAAATCCCTCCAACCGTTCTTCTGAATACACCAAAGGTTCGCCGATCAAGCTCAAATGTCACGCATATGGGGACCCTCCACTTAACGTTACGTGGCTGAAGAACGGCAAATCCCTGGGCAAAGCTAATCGAAGGCACCTCAAATCCAAAGGCTGGGTCTTACATTTTCGCAGGTTATCACTTTCTGATGCTGGATTATTCATTTGTACAGTGAGAAATGCATTTGGCAGCATTGCTAAAACGTTTGAAATCAAAGTTGTTGAGGAAGGAAAATTTGGTGAACCGGAGCACGAACCTCTCATTCTAGAGGAAGGACTAAAGAACGAAACATCCAAATCTGGAGATGACGCCACGTTTGTATGCTCTGCCATCAGTAGAAGTTACCCCAAGTTTCACTTTCTCAGATGGAAATCTTCCATAAACGTTTCAAGTGATTCAGATCCTTTCGATTTTGTCGACTTTAAGAAATCAAAGTTCAGGGAAATCCGTGAGGTAGCTAAGCCACACACTGAAAATCGTCAGGTTTTCACTCACCGTCTTATTATCCGCAATGTAACACTAGCCGATGAAGCCAAGTACACATGCGTAGTGGGGAATTCCGCTGGCTGGGTCTCGAAGCACGCATTTCTTACTGTACAGGGTAAAGAATACGTAGAAGACGAACCAGTCGGTAGCACAGATAAAAATTACACAACCACAGTAGCACCAAAAAACCAAGAGGCACAATCAGATAACCAGATACTAGTGGAAAAGGTTCCATTAGCGGCTCTCGTTGGTGTTCCAGTAGCTGTTGTTATACTTTTGATAGGTACTATTGTTTGGTGCTATTTTGTGACAAGGAAGCACCATTCTCGACAAAACTGGACAAATGATCATAAAGAATCTTTTCCTCACCAAGAGAAGGGCTGCCTGTCGCCACAGTTTTGCGAACAAAGAAAAGGCGAAACTAGGAATGTTAGTTTCAACGTCTATGTTGACTGTCCGAACGAAAAGATTCAGTCGCCTGCGAATGAACAGTTGTCGCCCAAAAAGTGTGCGCTTGAATTTGAACAAGATCCACCACTGGACGGGCTAATAATCCACAAAGAACTTCCAAGAACTCATTCGAATAGAACAAACCATCGCAAAAAACATCAAAGAGAGGGACTTGAGTTAAGTGAATCCAGGGGATCCCATTGAAGTAAAATGCTTTTGATTATGTTTGTCAAAGTTCCAATACCTACGTCTCTAAAGATAGAGCAAACATTACATGTTGTCATGCTGGTTTGAAGGACCTCGATTTATTCAAGCACTGGGCATAATCGACGTCGCAATTCCTGGATGCCAGCGACATGACATCGTGATATTAAATTGCTCTTACATAACAGCGACAGGGCTGATTTAGGCCCTCGGCGTCCTCGTGGGTAGAACGATAGAACATGACTTGACAAGTCTGTCATAATGAGTTCTTAACAGAACGGTTTATTTTGAGAAATTATAGTGGTTGCCTTTTTAAGACTTCAATTGGCTAAACCCTTTTGACCGTTCCAAGCACTTTGATATCGAAAAGTTGCTTTGTAGCATCATTCTGCAGGAGTTCATTTTGCGAACTAGTTTTTTGAGGGAGAGGATTGGGGTGTTCCCGACATAATATTCAAGCGATTCACTGGAGAACTACTTTTGTTGGGATTGAAACATTTTGGTGTTGAAGAAGAAAATTTTTGATTACCATTTCTCTTTCAATGACACCCTTTTTGGGGAGAGGAATTGATATTTGGTTTGGAATTTTTTGGGgagggctcagtgaatctagccccaggtatcacaAGAATGGCCTTCTCCTGAGCAACACGTTAACCACCTCGGTTCCGTTTCTAATGTTTCTAGGTATGCCGCCTTCTTCACTCCTCTTCCTCCCCTCTTCAGGCACGTACTATTTGTAAATGTCAACGACATGAGGGACAACCCTTGTGGGTCTGGATAATCTTCTACCTTTACTGACACAGGTAGCATATATTTCAACTTGCAACGAATTTATAgcactttGCGAAATAAATGTAAATAACTCGGTAAAGTTACGAACTCCTTTGAGTTGTTAATACGGCCCGAATGAATGGGACTGGCTCAACACACTATACAAAGAACACCTCACGTTTTACTTGAAGATAAAATACGTTTCTTTAAAAAAATAAATAGCTTATTGTTTCGAAGTTCTGTGTTTGCAATTTTATGTTAGTTTGTTGTAGCGAAGGAGGGTTTCCACTGGAAATAAATGTAAAATGTCGAAAGTGATGCTGCATTCTTAAGCAAGAAAGAATTCGCAAAAGACGCTGGTCATAGGCACGGGT

Transcript

eanc_s096.g0015.t1

Protein

Uniprot

Uniprot term	Description
A2AJ76	Hemicentin-2 OS=Mus musculus OX=10090 GN=Hmcn2 PE=1 SV=1
Q8NDA2	Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K26107	FGFRL1, FGFR5; fibroblast growth factor receptor-like 1	-	Signaling proteins	-	deepkoala