Gene detail

Detailed information of eanc_s102.g0038.t1 in Fimbriaphyllia ancora

Genomic Location: s102:507518...518392
NR annotation: CAH3131590.1, unnamed protein product, partial [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s102.g0038.t1

TGCGTTTAAAACTTACCTCCAACACGGTGACGGTGAGAACTCGAATTTCGCGTTCCACCCTCGCACTTACGCTTTGTCCTCAATCCATCCGAACAGGGGAACTATGCAGCTACTCGTTTTCCTTCTGCTTGGTATTGCTGTGGTTGTCTCTGGAGCTGTACCCAAAGTCGTTTCCACGAAAAATCTTGACGTTTATGTGAAAGATGAAGTTTTTAGTTGTCCAGTCAATGATCCTTACAGCAGAACCAACTGTGGTTATAACGGGATTACACAGCAACAATGCATGGACAGAGGGTGCTGCTTCGATAGCAGTGTGGCCAATGTTCCGTGGTGTTATTTCCCCTCAGTAAATGGTGGATGGAGCGCCTGGGGTGACTGGGAGGAATGCAACAAGATCTGTAGTCAGATTCGCCGGCGAACCTGCACCAATCCCCCTCCGCTTTATGGCGGCGCGCCATGTACTGGATCCGAAGCAGAGCGGTCCACTTGCTGTGATGTTTTTAGATGTCAAGTAGTTAATCCCGACAGCAGAACCAACTGTGGTTATAACGGGATCACGGAGCAACAATGCATGGACAAAGGGTGTTGCTTCGATAGCAGTGTGGCCAATGTTCCGTGGTGTTTTTCCCCTACAATTTTTAGATGTCCAGTAGATAATCCCAACAGCAGAGCCAGCTGTGGTTATGGCGGGATCACGGAGCAACAATGCATGGACAAAGGGTGTTGCTTCGATAGCAGTGTGGCCAATGTTCCGTGGTGTTTTTTCCCTACAGCTGTACCGCATACCTGGTACACCTTCGGAAACTGGAATTACTTCGTTGACGACCACTCCAACCTTTACTGGAAAGATGCTAGACAATATTGCCTAGATAACGGTGGAGATCTCGCTGTAATCAGTTCACCAGAAGAGAACACATTCATTTGGGATCTGATATCAGCACAGCCAAGAAAGGCAGTGTTGGGTGCGTGGATTGGATTTTCCAGACAAGGGTCGGACTCCAAGCTCCACTGGGTTGACCAGACACTAGTCCTCTCAGGCCAGTATCAGGAATGGAAAGACGGGAATCCAGACAACTCGAATGGTGTGGAAAAGTGTGGGCACATTATAGAAGGAAAATGGAATGACTTGTCATGTAATGCCTCTGGCGATGTGAAAACAGCTCCAGTTAATCTTTGCCAGAGACTTATCCGGACAAACCCAGTCTGGTATACTTTTGGTGACTGGAATTACTACGTTGACGATACTATCACCACTCAGTGGCAAGATGCTCGAACAGTTTGCAAAAAGAATGGAGGGGACCTCGCTATAATCAGGTCAGCCGCTGATAACTCATTCGTTATGAGTCTGATAAAGTTACAGAAGACACAAACAGAGTTTGGTGCTTGGTTTGGTTTGTTCCGCAAGAGTGACACCAAGTTCTACTGGATTGATGACACTCCTCTACAAGGACATTATTCAGCATGGAATACTGGAGAACCAATCAACTCTTACGGAGTGGAAGACTGTGGCCATATACTACCTAATGGGAAATGGAATGATTTCCGCTGCGATTCCGATGATGACCTGAGCAGAGCCCCGGTTATTGCCTGCCAGAGGCCGATACGATTTTCTAGATGTCCGAAAAATTATCCCACCAGCAGAACGAACTGTGGCCATGACGGGATCACAGAGCAGCAATGCATAGACCAAGGATGTTGCTTTGACAATAGTGTGACCCAAGTTGCGTGGTGTTTTTCACCCACAGCCGCTGCGTCTCCAGCCTGGCAGACTTACAAAAACCACAAGTACTACGTCGATGATTCTCCCACCATGAACTGGGGTGACGCCAGAAAAGTTTGCCAGAAAGTTGGAGGGGACCTTGCTATCATCAAGTCATCCGATGAGAACGACTTCATTTGGAAACTGGTGTTAAACCAAACCGCAGTCACAGAGCTGGGTGCATGGATTGGGCTGTTTCGAAGCGCTTCTAACTCCCGCGACTTTAACTGGGTTGACGGCGCAAAATATGATGATTCGTTTTCGCCATGGGCCTCTCTTCAGCCAGACAACTCCGGGGGGATGGAAAATTGTGTCCACATGAAACACGAAGGGAAATGGAATGACTTGCGTTGTAATTCAGATGGTGACATACTGAATGCTCCAGTTATCCTTTGCCAGAAGAGTACATGAGGGGCGCCGCCTTCATGAATTAAACCGGAAAACTGACT

Transcript

eanc_s102.g0038.t1

Protein

Uniprot

Uniprot term	Description
Q61830	Macrophage mannose receptor 1 OS=Mus musculus OX=10090 GN=Mrc1 PE=1 SV=2
P10667	Integumentary mucin A.1 OS=Xenopus laevis OX=8355 PE=1 SV=1
Q03404	Trefoil factor 2 OS=Mus musculus OX=10090 GN=Tff2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00088	Trefoil	Trefoil (P-type) domain	Domain	Interproscan
PF00059	Lectin_C	Lectin C-type domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016187	Homologous_superfamily	C-type lectin fold	Interproscan
IPR044913	Homologous_superfamily	P-type trefoil domain superfamily	Interproscan
IPR000519	Domain	P-type trefoil domain	Interproscan
IPR016186	Homologous_superfamily	C-type lectin-like/link domain superfamily	Interproscan
IPR001304	Domain	C-type lectin-like	Interproscan
IPR000884	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR017957	Conserved_site	P-type trefoil, conserved site	Interproscan
IPR017994	Family	P-type trefoil, chordata	Interproscan
IPR036383	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR050111	Family	C-type lectin and snaclec domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22803	MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0038023	Molecular Function	signaling receptor activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06560	MRC, CD206, CD280; mannose receptor, C type	-	Lectins	ko04091	deepkoala