Gene detail

Detailed information of eanc_s115.g0043.t1 in Fimbriaphyllia ancora

Genomic Location: s115:408974...418675
NR annotation: CAH3174010.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

eanc_s115.g0043.t1

ACGTGTCTGAGAAATGGGGGACAACGCCTTATTGTTACGCGCAAATAGAATGAGTTGTGAGCACGCATGTTGAATATACTCGATCTGGTTACGTTGGAGGCAGAAACGCTGAGTTAACTTATCACAGCAGTGTGAACCATTTTCCAACCATTCATGGCGGAGAAACCACAGGATCTCAAATCTGGAAATGACGCTGAAGAGCCCGCTGGGGAGAAACTGGATTTTGATGATGAAACACTAAAAGCAATAGCAGAGGTGTACAAGGATGAAGGTAACAACGAATACGAGAAGAAAGAATTCAAAGGCGCCGTAGACTTCTACACAGAGGGACTGGAAGTGAAGTGCAAGGATACCGAGCTGAATGCCAAACTGTACAGCAACAGAGCAACAGCTAATTTCCATTTAGGAAATTATAACGACACATTAGCAGATGCAAATGCTGCAGTCAAGTTGCAACCAACTTATATCAAGGCCATAGAAAGAGGAGCGAGTGCTTGTGTGAAGCTGGGTCTCCATGAAGAAGGCATTACCTGGTGTGATAAGGGATTGTCAATGCAAAGCACAAACAAGACGTTGTTAGATTTAAGGAGTAGATGCATTGATGAAGTGAAAGAATTGGAGAGAAACGAACAAGAAAAGAAGGAGAGCAAAGTGGTAATCTGCGCAGTCCGCGAGGGAAACGATACGGAAAAGGACTGTAGTGCCTCTGCAAGTTCAAACGAATCGAAGAAGGGTTTAGAAGTAACGCCAGAAATCTTCTCAAACAAAGCCGCAGATGTAATACTGTTTCCTGTGATTTGGGCGAATGACAAATGTGGAAGCCTTGGAGATTGCAAGCAGGCTATTGTTTATCACGAACTCCAGCTTAAGGTATCGAAAGAAATGGGTGACCATTGCGGCGAAGGTGCTGCGTATTCTAATCTTGGCAGTGCTTATTGTCGTCTGGGAAATTTTACAGAGGCCATGCGTTATCACGAACTTTGCCTGGAAAATGTCAAAGAGGTTGGTGATCGACTAGGAGAAGGGGACGCCTACTGTGATCTTGGCAACGATTATCTGAGTGTCGGAGATGCAAAAAAGGCAATTGAATATCTCGGACTATCCCTGGAAATCTATAAAGAAGTTGGAGACAGAGATCGCGAAGGAAAGGCGTATTGTGGTCTGGGCAATGGTCATTTACAACTTGGATACCCCAATAAAGCCATTCAGTACTTTCAATTGTTTCTTGAAATTTCTAGAGAATTAGGAAACAGGTCTTGTGAAGGGGTCGCGTGTGCTAATTTGGGCAGCTATTACCACAGTTTGGGGGATTTCAAAAAGGCCATTCACTATCATGAACAATTTCTAGAAATCACAAAAGAAACCAGAAACAGGATTCAAGAGGGAACTGCTTATGGTTTACTTGGCAAGAATTGTCAAAGCCTTGGCTCtttcaaaagcgccattcactaccatgagctccacctaaaaattgctaaagaagttggtaacatgaataatgaagggttcgcgtacggttaccttgggaatggtcacgctggtctcggagattttaagaaggccattcactatcatGAACTGTGTCTAAAACAAGCCAAACAGAGTGGAAACAGGGCTAACGTAGGAGGCGCTTATGGTAGTCTTGGCAGCTGTTTTCAAAAGCTCAGTGACTTCAAAAAGGCAATTTACTATCACGAACGTTCTCTACAAATTTTCCAAGAATTGGGATTGAAGACTGCGCAAGGCCAGGCGTATAGAAATCTGGGAACGGATTATGAAAGTCTCGGAGACTTCAAGAAGGCCATACTGTACCACGAAAAACATTTAGAAATTGCCAAACTTTTAGGCAACAAAAACGAGGAAGGAATTGCGTATGGTAACCTTGGCGGCAATTATTGGTCTTTCGGAAATTTGAAAAAGGCTATTCGCTACCATGAATCCCAGTTAAGAATTGCCAAAAGTCTGGGCAAAAGAGCTATGGAAGGAGAGGCGTATGGTGGCCTGGGCGTTGATTATCATACTCTCATGGACACAGATAAGGCCATTCAGTATCTTGAACTCCATTTAGAAattgccaaggaagtgggggacaagtccttagaagggaacgccttaggtaaccttggcaatgcttatgcatgtatcggcgatttggaaaaggccatacactatcatGAACTGCAACTCAAATTTTCAAAAGAAACTGGAAAGAGTGTCGAAGAGGCAGCTGCTTACAACAACCTCGGTTGTAGCTTTGAATCTCAAGGGTCTTTAATCAAGGCATCAACTTGCTTTCGCTCAAGTGTTAGAGTACTAAACGATGTAAGGGCTCGCCTTTATCTTGAAGACGAGCGGAAAATTAATTTCCGCCATCTGTATCGAAAGGCCTACACCAGATTATGGATAGTGGAATTGAAACAAGGCAAGCTGCTGGATGCGTTGCTAGCTGCTGAACAAGGCAGAACTCAAGCCCTCAAAGATCTCATGGCATACAATTATGGACTGGTAGCACATGAAGATGATTCCGGAATACTGGATGAAGCTATTGTCGACATGATAAATCAGCTCGAGCCAAGTACGATCTTCCTAGCATTGACCAGGAAAGAAGTTGTTTCTTGGCTTTTTCAGCGGGGAAACCTTTTCTTCTGGACTCGTCCGATCAGCGACAATCGCGACCAGTTAGACGATACCAAAATGCACTTTGATTCCTTAGTGAGGTCTGCTCTTGCCGAAATTGGTGTAGCAGGATTGAGGTGCGAGGATCGCTCAATGGGTGAAGAGGATAAAGATGAGAAGCGAGAGAATGGGTCGTTGGATCAGACGCAATCGTATCCAGAACAGAGTCTGTCTAGTGCTTTGAGAACATTGTATGACATCACTGTCAGCTCCATTGCAGATGCAAATtttgatggggatgaacttAAAGATGCTAGAAATAAAAGTCGTACTTGCAAAGAAGTGAATTCAGCGAACTCAGTTATTCACCGGCACAAAGCACCATCTTACTTTGCAATGGATTGTCTTGAGACGTCCTCGACTTTTTCATCGCAAGGAGATAAAACTACACCTTAGCAAATGAATTACACTCCAGAAC

Transcript

eanc_s115.g0043.t1

Protein

Uniprot

Uniprot term	Description
Q5EA11	Tetratricopeptide repeat protein 4 OS=Bos taurus OX=9913 GN=TTC4 PE=2 SV=2
O95801	Tetratricopeptide repeat protein 4 OS=Homo sapiens OX=9606 GN=TTC4 PE=1 SV=3
Q8R3H9	Tetratricopeptide repeat protein 4 OS=Mus musculus OX=10090 GN=Ttc4 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13181	TPR_8	Tetratricopeptide repeat	Repeat	Interproscan
PF13424	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF13176	TPR_7	Tetratricopeptide repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR052386	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954	LD33695P	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000132	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938	Cellular Component	cell cortex	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15837	GPSM2; G-protein signaling modulator 2	-	Cilium and associated proteins	ko03037	deepkoala