Detailed information of evm.model.Ap1.1344.1.5f15df9c in Astrangia poculata

Genomic Location: Ap1:13361692...13398284
NR annotation: XP_020625961.1, nuclear cap-binding protein subunit 1-like isoform X2 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
B4L2J8Nuclear cap-binding protein subunit 1 OS=Drosophila mojavensis OX=7230 GN=Cbp80 PE=3 SV=1
B3NU52Nuclear cap-binding protein subunit 1 OS=Drosophila erecta OX=7220 GN=Cbp80 PE=3 SV=1
B4NC41Nuclear cap-binding protein subunit 1 OS=Drosophila willistoni OX=7260 GN=Cbp80 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09088MIF4G_likeMIF4G likeRepeatInterproscan
PF09090MIF4G_like_2MIF4G likeRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR027159FamilyNuclear cap-binding protein subunit 1Interproscan
IPR015172DomainMIF4G-like, type 1Interproscan
IPR015174DomainMIF4G-like, type 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12412CAP BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000184Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0000339Molecular FunctionRNA cap bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005845Cellular Componentobsolete mRNA cap binding complexInterproscan
GO:0005846Cellular Componentnuclear cap binding complexInterproscan
GO:0006406Biological ProcessmRNA export from nucleusInterproscan
GO:0016070Biological ProcessRNA metabolic processInterproscan

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