Detailed information of evm.model.Ap1.1397 in Astrangia poculata

Genomic Location: Ap1:14031597...14040278
NR annotation: XP_027058172.1, uncharacterized protein LOC113684949, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9UGM3Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Homo sapiens OX=9606 GN=DMBT1 PE=1 SV=2
Q95218Scavenger receptor cysteine-rich domain-containing protein DMBT1 OS=Oryctolagus cuniculus OX=9986 GN=Dmbt1 PE=1 SV=2
Q2VL90Scavenger receptor cysteine-rich type 1 protein M130 OS=Sus scrofa OX=9823 GN=CD163 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000998DomainMAM domainInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR001190DomainSRCR domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan
IPR006585DomainFucolectin tachylectin-4 pentraxin-1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan

TOP