Detailed information of evm.model.Ap1.1946 in Astrangia poculata

Genomic Location: Ap1:20259653...20283552
NR annotation: XP_020621803.1, DIS3-like exonuclease 1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JN80DIS3-like exonuclease 1 OS=Bos taurus OX=9913 GN=DIS3L PE=2 SV=2
Q8TF46DIS3-like exonuclease 1 OS=Homo sapiens OX=9606 GN=DIS3L PE=1 SV=2
Q5R5N8DIS3-like exonuclease 1 OS=Pongo abelii OX=9601 GN=DIS3L PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17215Rrp44_S1S1 domainDomainInterproscan
PF17216Rrp44_CSD1Rrp44-like cold shock domainDomainInterproscan
PF00773RNBRNB domainDomainInterproscan
PF17849OB_Dis3Dis3-like cold-shock domain 2 (CSD2)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR033770DomainExosome complex exonuclease RRP44, S1 domainInterproscan
IPR050180FamilyRNR RibonucleaseInterproscan
IPR033771DomainRrp44-like cold shock domainInterproscan
IPR022966Conserved_siteRibonuclease II/R, conserved siteInterproscan
IPR001900DomainRibonuclease II/RInterproscan
IPR041505DomainDis3-like cold-shock domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23355RIBONUCLEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000177Cellular Componentcytoplasmic exosome (RNase complex)Interproscan
GO:0016075Biological ProcessrRNA catabolic processInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004540Molecular FunctionRNA nuclease activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18681DIS3L; DIS3-like exonuclease 1EC:3.1.13.-
Messenger RNA biogenesisko03019deepkoala

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