Detailed information of evm.model.Ap1.218 in Astrangia poculata

Genomic Location: Ap1:2069756...2080899
NR annotation: KAJ7385429.1, ligand-gated sodium channel [Desmophyllum pertusum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
H1AFJ5Epithelial sodium channel subunit alpha OS=Neoceratodus forsteri OX=7892 GN=scnn1a PE=1 SV=1
H1AFJ6Epithelial sodium channel subunit beta OS=Neoceratodus forsteri OX=7892 GN=scnn1b PE=2 SV=1
K7FQW8Epithelial sodium channel subunit beta OS=Pelodiscus sinensis OX=13735 GN=SCNN1B PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00858ASCAmiloride-sensitive sodium channelFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001873FamilyEpithelial sodium channelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11690AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005272Molecular Functionsodium channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0006814Biological Processsodium ion transportInterproscan
GO:0015280Molecular Functionligand-gated sodium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0035725Biological Processsodium ion transmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04824SCNN1A, ENACA; amiloride-sensitive sodium channel subunit alpha-Ion channelsko04040deepkoala

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