Detailed information of evm.model.Ap1.2548 in Astrangia poculata

Genomic Location: Ap1:26222770...26240359
NR annotation: XP_020627001.1, uncharacterized protein LOC110064306 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076RRM_1RNA recognition motifDomainInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan
PF00567TUDORTudor domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR002999DomainTudor domainInterproscan
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR050374FamilyRRT5/SRSF/Splicing Factor SRInterproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23003RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

TOP