Detailed information of evm.model.Ap1.3241 in Astrangia poculata

Genomic Location: Ap1:33124964...33142901
NR annotation: XP_027055646.1, E3 ubiquitin-protein ligase LRSAM1-like isoform X1 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q80ZI6E3 ubiquitin-protein ligase LRSAM1 OS=Mus musculus OX=10090 GN=Lrsam1 PE=1 SV=1
Q6UWE0E3 ubiquitin-protein ligase LRSAM1 OS=Homo sapiens OX=9606 GN=LRSAM1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF12799LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660DomainSterile alpha motif domainInterproscan
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR025875RepeatLeucine rich repeat 4Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10641LRSAM1; E3 ubiquitin-protein ligase LRSAM1EC:2.3.2.27
Ubiquitin systemko04121deepkoala

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